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(v1.4.0.9026) docu update

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dr. M.S. (Matthijs) Berends
2020-11-24 11:47:54 +01:00
parent b045b571a6
commit 7b42b15c90
21 changed files with 47 additions and 50 deletions
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4
man/first_isolate.Rd
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@ -50,7 +50,7 @@ filter_first_weighted_isolate(
)
}
\arguments{
\item{x, .data}{a \link{data.frame} containing isolates.}
\item{x}{a \link{data.frame} containing isolates.}
\item{col_date}{column name of the result date (or date that is was received on the lab), defaults to the first column with a date class}
@ -84,7 +84,7 @@ filter_first_weighted_isolate(
\item{include_unknown}{logical to determine whether 'unknown' microorganisms should be included too, i.e. microbial code \code{"UNKNOWN"}, which defaults to \code{FALSE}. For WHONET users, this means that all records with organism code \code{"con"} (\emph{contamination}) will be excluded at default. Isolates with a microbial ID of \code{NA} will always be excluded as first isolate.}
\item{...}{parameters passed on to the \code{\link[=first_isolate]{first_isolate()}} function}
\item{...}{parameters passed on to \code{\link[=first_isolate]{first_isolate()}} when using \code{\link[=filter_first_isolate]{filter_first_isolate()}}, or parameters passed on to \code{\link[=key_antibiotics]{key_antibiotics()}} when using \code{\link[=filter_first_weighted_isolate]{filter_first_weighted_isolate()}}}
}
\value{
A \code{\link{logical}} vector