mirror of
https://github.com/msberends/AMR.git
synced 2025-07-08 09:11:51 +02:00
Built site for AMR: 1.8.2.9061@eed1c14
This commit is contained in:
@ -10,7 +10,7 @@
|
||||
|
||||
<a class="navbar-brand me-2" href="../index.html">AMR (for R)</a>
|
||||
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">1.8.2.9060</small>
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">1.8.2.9061</small>
|
||||
|
||||
|
||||
<button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
|
||||
@ -132,10 +132,10 @@
|
||||
</div>
|
||||
|
||||
<div class="section level2">
|
||||
<h2 class="pkg-version" data-toc-text="1.8.2.9060" id="amr-1829060">AMR 1.8.2.9060<a class="anchor" aria-label="anchor" href="#amr-1829060"></a></h2>
|
||||
<h2 class="pkg-version" data-toc-text="1.8.2.9061" id="amr-1829061">AMR 1.8.2.9061<a class="anchor" aria-label="anchor" href="#amr-1829061"></a></h2>
|
||||
<p>This version will eventually become v2.0! We’re happy to reach a new major milestone soon!</p>
|
||||
<div class="section level4">
|
||||
<h4 id="breaking-1-8-2-9060">Breaking<a class="anchor" aria-label="anchor" href="#breaking-1-8-2-9060"></a></h4>
|
||||
<h4 id="breaking-1-8-2-9061">Breaking<a class="anchor" aria-label="anchor" href="#breaking-1-8-2-9061"></a></h4>
|
||||
<ul><li>
|
||||
<strong>Removed all species of the taxonomic kingdom Chromista</strong> from the package. This was done for multiple reasons:
|
||||
<ul><li>CRAN allows packages to be around 5 MB maximum, some packages are exempted but this package is not one of them</li>
|
||||
@ -152,7 +152,7 @@
|
||||
<li>Using <code>units</code> in <code>ab_ddd(..., units = "...")</code> had been deprecated and is now not supported anymore. Use <code><a href="../reference/ab_property.html">ab_ddd_units()</a></code> instead.</li>
|
||||
</ul></div>
|
||||
<div class="section level4">
|
||||
<h4 id="new-1-8-2-9060">New<a class="anchor" aria-label="anchor" href="#new-1-8-2-9060"></a></h4>
|
||||
<h4 id="new-1-8-2-9061">New<a class="anchor" aria-label="anchor" href="#new-1-8-2-9061"></a></h4>
|
||||
<ul><li>
|
||||
<strong>EUCAST 2022 and CLSI 2022 guidelines</strong> have been added for <code><a href="../reference/as.rsi.html">as.rsi()</a></code>. EUCAST 2022 (v12.0) is now the new default guideline for all MIC and disks diffusion interpretations, and for <code><a href="../reference/eucast_rules.html">eucast_rules()</a></code> to apply EUCAST Expert Rules.</li>
|
||||
<li>Support for the following languages: Chinese, Greek, Japanese, Polish, Turkish and Ukrainian. We are very grateful for the valuable input by our colleagues from other countries. The <code>AMR</code> package is now available in 16 languages. The automatic language determination will give a note on systems in supported languages.</li>
|
||||
@ -194,7 +194,7 @@
|
||||
</li>
|
||||
</ul></div>
|
||||
<div class="section level4">
|
||||
<h4 id="changes-1-8-2-9060">Changes<a class="anchor" aria-label="anchor" href="#changes-1-8-2-9060"></a></h4>
|
||||
<h4 id="changes-1-8-2-9061">Changes<a class="anchor" aria-label="anchor" href="#changes-1-8-2-9061"></a></h4>
|
||||
<ul><li>For <code><a href="../reference/as.rsi.html">as.rsi()</a></code>:
|
||||
<ul><li>Fixed certain EUCAST breakpoints for MIC values</li>
|
||||
<li>Allow <code>NA</code> values (e.g. <code>as.rsi(as.disk(NA), ...)</code>)</li>
|
||||
@ -233,7 +233,7 @@
|
||||
<li>Cleaning columns with <code><a href="../reference/as.rsi.html">as.rsi()</a></code>, <code><a href="../reference/as.mic.html">as.mic()</a></code>, or <code><a href="../reference/as.disk.html">as.disk()</a></code> will now show the column name in the warning for invalid results</li>
|
||||
</ul></div>
|
||||
<div class="section level4">
|
||||
<h4 id="other-1-8-2-9060">Other<a class="anchor" aria-label="anchor" href="#other-1-8-2-9060"></a></h4>
|
||||
<h4 id="other-1-8-2-9061">Other<a class="anchor" aria-label="anchor" href="#other-1-8-2-9061"></a></h4>
|
||||
<ul><li>New website to make use of the new Bootstrap 5 and pkgdown 2.0. The website now contains results for all examples and will be automatically regenerated with every change to our repository, using GitHub Actions</li>
|
||||
<li>Added Peter Dutey-Magni, Dmytro Mykhailenko, Anton Mymrikov, and Jonas Salm as contributors, to thank them for their valuable input</li>
|
||||
<li>All R and Rmd files in this project are now styled using the <code>styler</code> package</li>
|
||||
@ -377,11 +377,11 @@
|
||||
|
||||
|
||||
<footer><div class="pkgdown-footer-left">
|
||||
<p></p><p><code>AMR</code> (for R). Developed at the <a target="_blank" href="https://www.rug.nl" class="external-link">University of Groningen</a> in collaboration with non-profit organisations<br><a target="_blank" href="https://www.certe.nl" class="external-link">Certe Medical Diagnostics and Advice Foundation</a> and <a target="_blank" href="https://www.umcg.nl" class="external-link">University Medical Center Groningen</a>.</p>
|
||||
<p></p><p><code>AMR</code> (for R). Free and open-source, licenced under the <a target="_blank" href="https://github.com/msberends/AMR/blob/main/LICENSE" class="external-link">GNU General Public License version 2.0 (GPL-2)</a>.<br>Developed at the <a target="_blank" href="https://www.rug.nl" class="external-link">University of Groningen</a> and <a target="_blank" href="https://www.umcg.nl" class="external-link">University Medical Center Groningen</a> in The Netherlands.</p>
|
||||
</div>
|
||||
|
||||
<div class="pkgdown-footer-right">
|
||||
<p></p><p><a target="_blank" href="https://www.rug.nl" class="external-link"><img src="https://github.com/msberends/AMR/raw/main/pkgdown/logos/logo_rug.svg" style="max-width: 150px;"></a></p>
|
||||
<p></p><p><a target="_blank" href="https://www.rug.nl" class="external-link"><img src="https://github.com/msberends/AMR/raw/main/pkgdown/logos/logo_rug.svg" style="max-width: 150px;"></a><a target="_blank" href="https://www.umcg.nl" class="external-link"><img src="https://github.com/msberends/AMR/raw/main/pkgdown/logos/logo_umcg.svg" style="max-width: 150px;"></a></p>
|
||||
</div>
|
||||
|
||||
</footer></div>
|
||||
|
Reference in New Issue
Block a user