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support for Dutch national MDR guideline

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dr. M.S. (Matthijs) Berends
2024-12-15 20:15:52 +01:00
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@ -77,7 +77,7 @@ Ordered \link{factor} with levels \code{Negative} < \verb{Positive, unconfirmed}
}
}
\description{
Determine which isolates are multidrug-resistant organisms (MDRO) according to international, national and custom guidelines.
Determine which isolates are multidrug-resistant organisms (MDRO) according to international, national, or custom guidelines.
}
\details{
These functions are context-aware. This means that the \code{x} argument can be left blank if used inside a \link{data.frame} call, see \emph{Examples}.
@ -111,10 +111,17 @@ The international guideline for multi-drug resistant tuberculosis - World Health
The German national guideline - Mueller et al. (2015) Antimicrobial Resistance and Infection Control 4:7; \doi{10.1186/s13756-015-0047-6}
\item \code{guideline = "BRMO"}
The Dutch national guideline - Rijksinstituut voor Volksgezondheid en Milieu "WIP-richtlijn BRMO (Bijzonder Resistente Micro-Organismen) (ZKH)" (\href{https://www.rivm.nl/wip-richtlijn-brmo-bijzonder-resistente-micro-organismen-zkh}{link})
The Dutch national guideline - Samenwerkingverband Richtlijnen Infectiepreventie (SRI) (2024) "Bijzonder Resistente Micro-Organismen (BRMO)" (\href{https://www.sri-richtlijnen.nl/brmo}{link})
Also:
\itemize{
\item \code{guideline = "BRMO 2017"}
The former Dutch national guideline - Werkgroep Infectiepreventie (WIP), RIVM, last revision as of 2017: "Bijzonder Resistente Micro-Organismen (BRMO)"
}
}
Please suggest your own (country-specific) guidelines by letting us know: \url{https://github.com/msberends/AMR/issues/new}.
Please suggest to implement guidelines by letting us know: \url{https://github.com/msberends/AMR/issues/new}.
}
\section{Using Custom Guidelines}{