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(v2.1.1.9064) unit tests

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dr. M.S. (Matthijs) Berends
2024-07-16 15:55:58 +02:00
parent 640888f408
commit 7f344836ea
7 changed files with 60 additions and 15 deletions
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data-raw/_pre_commit_checks.R
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@ -122,7 +122,8 @@ create_species_cons_cops <- function(type = c("CoNS", "CoPS")) {
"vitulinus", "vitulus", "warneri", "xylosus",
"caledonicus", "canis",
"durrellii", "lloydii",
"ratti", "taiwanensis", "veratri", "urealyticus"
"ratti", "taiwanensis", "veratri", "urealyticus",
"americanisciuri", "marylandisciuri", "shinii", "brunensis"
) |
# old, now renamed to S. schleiferi (but still as synonym in our data of course):
(MO_staph$species == "schleiferi" & MO_staph$subspecies %in% c("schleiferi", ""))),