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(v1.1.0.9004) lose dependencies
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@@ -6,7 +6,7 @@
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\alias{filter_first_weighted_isolate}
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\title{Determine first (weighted) isolates}
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\source{
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Methodology of this function is based on:
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Methodology of this function is strictly based on:
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\strong{M39 Analysis and Presentation of Cumulative Antimicrobial Susceptibility Test Data, 4th Edition}, 2014, \emph{Clinical and Laboratory Standards Institute (CLSI)}. \url{https://clsi.org/standards/products/microbiology/documents/m39/}.
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}
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@@ -142,6 +142,7 @@ On our website \url{https://msberends.gitlab.io/AMR} you can find \href{https://
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# `example_isolates` is a dataset available in the AMR package.
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# See ?example_isolates.
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\dontrun{
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library(dplyr)
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# Filter on first isolates:
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example_isolates \%>\%
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@@ -162,14 +163,12 @@ B <- example_isolates \%>\%
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# Have a look at A and B.
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# B is more reliable because every isolate is counted only once.
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# Gentamicin resitance in hospital D appears to be 3.7\% higher than
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# Gentamicin resistance in hospital D appears to be 3.7\% higher than
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# when you (erroneously) would have used all isolates for analysis.
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## OTHER EXAMPLES:
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\dontrun{
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# Short-hand versions:
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example_isolates \%>\%
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filter_first_isolate()
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