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(v1.1.0.9004) lose dependencies

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dr. M.S. (Matthijs) Berends
2020-05-16 13:05:47 +02:00
parent 9fce546901
commit 7f3da74b17
111 changed files with 3211 additions and 2345 deletions
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8
man/join.Rd
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@@ -9,7 +9,7 @@
\alias{full_join_microorganisms}
\alias{semi_join_microorganisms}
\alias{anti_join_microorganisms}
\title{Join a table with \link{microorganisms}}
\title{Join \link{microorganisms} to a data set}
\usage{
inner_join_microorganisms(x, by = NULL, suffix = c("2", ""), ...)
@@ -36,7 +36,9 @@ anti_join_microorganisms(x, by = NULL, ...)
Join the data set \link{microorganisms} easily to an existing table or character vector.
}
\details{
\strong{Note:} As opposed to the \code{\link[dplyr:join]{dplyr::join()}} functions of \code{dplyr}, \code{\link{character}} vectors are supported and at default existing columns will get a suffix \code{"2"} and the newly joined columns will not get a suffix. See \code{\link[dplyr:join]{dplyr::join()}} for more information.
\strong{Note:} As opposed to the \code{\link[=join]{join()}} functions of \code{dplyr}, \code{\link{character}} vectors are supported and at default existing columns will get a suffix \code{"2"} and the newly joined columns will not get a suffix.
These functions rely on \code{\link[=merge]{merge()}}, a base R function to do joins.
}
\section{Stable lifecycle}{
@@ -55,6 +57,7 @@ On our website \url{https://msberends.gitlab.io/AMR} you can find \href{https://
left_join_microorganisms(as.mo("K. pneumoniae"))
left_join_microorganisms("B_KLBSL_PNE")
\dontrun{
library(dplyr)
example_isolates \%>\% left_join_microorganisms()
@@ -68,3 +71,4 @@ colnames(df)
df_joined <- left_join_microorganisms(df, "bacteria")
colnames(df_joined)
}
}