mirror of
https://github.com/msberends/AMR.git
synced 2025-12-13 23:50:20 +01:00
(v1.1.0.9004) lose dependencies
This commit is contained in:
16
man/like.Rd
16
man/like.Rd
@@ -6,7 +6,7 @@
|
||||
\alias{\%like_case\%}
|
||||
\title{Pattern Matching}
|
||||
\source{
|
||||
Idea from the \href{https://github.com/Rdatatable/data.table/blob/master/R/like.R}{\code{like} function from the \code{data.table} package}, but made it case insensitive at default and let it support multiple patterns. Also, if the regex fails the first time, it tries again with \code{perl = TRUE}.
|
||||
Idea from the \href{https://github.com/Rdatatable/data.table/blob/master/R/like.R}{\code{like} function from the \code{data.table} package}
|
||||
}
|
||||
\usage{
|
||||
like(x, pattern, ignore.case = TRUE)
|
||||
@@ -29,7 +29,13 @@ A \code{\link{logical}} vector
|
||||
Convenient wrapper around \code{\link[=grep]{grep()}} to match a pattern: \code{x \%like\% pattern}. It always returns a \code{\link{logical}} vector and is always case-insensitive (use \code{x \%like_case\% pattern} for case-sensitive matching). Also, \code{pattern} can be as long as \code{x} to compare items of each index in both vectors, or they both can have the same length to iterate over all cases.
|
||||
}
|
||||
\details{
|
||||
When running a regular expression fails, these functions try again with \code{base::grepl(..., perl = TRUE)}.
|
||||
The \verb{\%like\%} function:
|
||||
\itemize{
|
||||
\item Is case insensitive (use \verb{\%like_case\%} for case-sensitive matching)
|
||||
\item Supports multiple patterns
|
||||
\item Checks if \code{pattern} is a regular expression and sets \code{fixed = TRUE} if not, to greatly improve speed
|
||||
\item Tries again with \code{perl = TRUE} if regex fails
|
||||
}
|
||||
|
||||
Using RStudio? This function can also be inserted from the Addins menu and can have its own Keyboard Shortcut like \code{Ctrl+Shift+L} or \code{Cmd+Shift+L} (see \code{Tools} > \verb{Modify Keyboard Shortcuts...}).
|
||||
}
|
||||
@@ -61,11 +67,11 @@ b <- c( "case", "diff", "yet")
|
||||
a \%like\% b
|
||||
#> TRUE TRUE TRUE
|
||||
|
||||
# get frequencies of bacteria whose name start with 'Ent' or 'ent'
|
||||
# get isolates whose name start with 'Ent' or 'ent'
|
||||
library(dplyr)
|
||||
example_isolates \%>\%
|
||||
filter(mo_name(mo) \%like\% "^ent") \%>\%
|
||||
freq(mo_genus(mo))
|
||||
filter(mo_name(mo) \%like\% "^ent") \%>\%
|
||||
freq(mo)
|
||||
}
|
||||
\seealso{
|
||||
\code{\link[base:grep]{base::grep()}}
|
||||
|
||||
Reference in New Issue
Block a user