diff --git a/.github/prehooks/commit-msg b/.github/prehooks/commit-msg
index d3d9628a..1dc04bf3 100755
--- a/.github/prehooks/commit-msg
+++ b/.github/prehooks/commit-msg
@@ -60,5 +60,7 @@ else
 fi
 
 git add data-raw/*
+git add PythonPackage/*
+git add -u
 
 exit 0
diff --git a/.github/prehooks/pre-commit b/.github/prehooks/pre-commit
index 9b92fc38..c95c4156 100755
--- a/.github/prehooks/pre-commit
+++ b/.github/prehooks/pre-commit
@@ -115,6 +115,9 @@ echo "${currentversion}" > .git/commit_version.tmp
 bash data-raw/_generate_GPT_knowledge_input.sh "${currentversion}"
 cd data-raw
 bash _generate_python_wrapper.sh
+cd ..
+git add data-raw/*
 git add PythonPackage/*
+git add -u
 
 exit 0
diff --git a/DESCRIPTION b/DESCRIPTION
index 0d7bb751..89838e50 100644
--- a/DESCRIPTION
+++ b/DESCRIPTION
@@ -1,5 +1,5 @@
 Package: AMR
-Version: 2.1.1.9108
+Version: 2.1.1.9109
 Date: 2024-11-21
 Title: Antimicrobial Resistance Data Analysis
 Description: Functions to simplify and standardise antimicrobial resistance (AMR)
diff --git a/NEWS.md b/NEWS.md
index 4d24d1aa..472dcb62 100644
--- a/NEWS.md
+++ b/NEWS.md
@@ -1,4 +1,4 @@
-# AMR 2.1.1.9108
+# AMR 2.1.1.9109
 
 *(this beta version will eventually become v3.0. We're happy to reach a new major milestone soon, which will be all about the new One Health support! Install this beta using [the instructions here](https://msberends.github.io/AMR/#latest-development-version).)*
 
diff --git a/PythonPackage/AMR/AMR.egg-info/PKG-INFO b/PythonPackage/AMR/AMR.egg-info/PKG-INFO
index 43319c06..5113b60e 100644
--- a/PythonPackage/AMR/AMR.egg-info/PKG-INFO
+++ b/PythonPackage/AMR/AMR.egg-info/PKG-INFO
@@ -1,6 +1,6 @@
 Metadata-Version: 2.1
 Name: AMR
-Version: 2.1.1.9107
+Version: 2.1.1.9109
 Summary: A Python wrapper for the AMR R package
 Home-page: https://github.com/msberends/AMR
 Author: Dr. Matthijs Berends
diff --git a/PythonPackage/AMR/dist/AMR-2.1.1.9107-py3-none-any.whl b/PythonPackage/AMR/dist/AMR-2.1.1.9109-py3-none-any.whl
similarity index 84%
rename from PythonPackage/AMR/dist/AMR-2.1.1.9107-py3-none-any.whl
rename to PythonPackage/AMR/dist/AMR-2.1.1.9109-py3-none-any.whl
index af61e354..8fb5c5d1 100644
Binary files a/PythonPackage/AMR/dist/AMR-2.1.1.9107-py3-none-any.whl and b/PythonPackage/AMR/dist/AMR-2.1.1.9109-py3-none-any.whl differ
diff --git a/PythonPackage/AMR/dist/amr-2.1.1.9107.tar.gz b/PythonPackage/AMR/dist/amr-2.1.1.9107.tar.gz
deleted file mode 100644
index e882e2c7..00000000
Binary files a/PythonPackage/AMR/dist/amr-2.1.1.9107.tar.gz and /dev/null differ
diff --git a/PythonPackage/AMR/dist/amr-2.1.1.9109.tar.gz b/PythonPackage/AMR/dist/amr-2.1.1.9109.tar.gz
new file mode 100644
index 00000000..4a516060
Binary files /dev/null and b/PythonPackage/AMR/dist/amr-2.1.1.9109.tar.gz differ
diff --git a/PythonPackage/AMR/setup.py b/PythonPackage/AMR/setup.py
index 42a10029..c73b7549 100644
--- a/PythonPackage/AMR/setup.py
+++ b/PythonPackage/AMR/setup.py
@@ -2,7 +2,7 @@ from setuptools import setup, find_packages
 
 setup(
     name='AMR',
-    version='2.1.1.9107',
+    version='2.1.1.9109',
     packages=find_packages(),
     install_requires=[
         'rpy2',
diff --git a/data-raw/gpt_training_text_v2.1.1.9107.txt b/data-raw/gpt_training_text_v2.1.1.9109.txt
similarity index 99%
rename from data-raw/gpt_training_text_v2.1.1.9107.txt
rename to data-raw/gpt_training_text_v2.1.1.9109.txt
index 8019823b..b463de6c 100644
--- a/data-raw/gpt_training_text_v2.1.1.9107.txt
+++ b/data-raw/gpt_training_text_v2.1.1.9109.txt
@@ -1,5 +1,5 @@
 This files contains all context you must know about the AMR package for R.
-First and foremost, you are trained on version 2.1.1.9107. Remember this whenever someone asks which AMR package version you’re at.
+First and foremost, you are trained on version 2.1.1.9109. Remember this whenever someone asks which AMR package version you’re at.
 --------------------------------
 
 THE PART HEREAFTER CONTAINS CONTENTS FROM FILE 'NAMESPACE':