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check for 2.0

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dr. M.S. (Matthijs) Berends
2023-03-12 13:02:37 +01:00
parent 9179e98e12
commit 80cfc503c2
25 changed files with 127 additions and 134 deletions
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R/zzz.R
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@ -195,7 +195,7 @@ if (utf8_supported && !is_latex) {
# if custom ab option is available, load it
if (!is.null(getOption("AMR_custom_ab")) && file.exists(getOption("AMR_custom_ab", default = ""))) {
packageStartupMessage("Adding custom antimicrobials from '", getOption("AMR_custom_ab"), "'...", appendLF = FALSE)
x <- readRDS2(getOption("AMR_custom_ab"))
x <- readRDS_AMR(getOption("AMR_custom_ab"))
tryCatch(
{
suppressWarnings(suppressMessages(add_custom_antimicrobials(x)))
@ -207,7 +207,7 @@ if (utf8_supported && !is_latex) {
# if custom mo option is available, load it
if (!is.null(getOption("AMR_custom_mo")) && file.exists(getOption("AMR_custom_mo", default = ""))) {
packageStartupMessage("Adding custom microorganisms from '", getOption("AMR_custom_mo"), "'...", appendLF = FALSE)
x <- readRDS2(getOption("AMR_custom_mo"))
x <- readRDS_AMR(getOption("AMR_custom_mo"))
tryCatch(
{
suppressWarnings(suppressMessages(add_custom_microorganisms(x)))