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add XPT files for SAS software

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dr. M.S. (Matthijs) Berends
2023-05-12 10:07:55 +02:00
parent 91fa73dedf
commit 8179092c57
11 changed files with 16 additions and 12 deletions
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7
vignettes/datasets.Rmd
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@ -50,6 +50,7 @@ download_txt <- function(filename) {
feather <- paste0(filename, ".feather")
parquet <- paste0(filename, ".parquet")
sas <- paste0(filename, ".sas")
xpt <- paste0(filename, ".xpt")
spss <- paste0(filename, ".sav")
stata <- paste0(filename, ".dta")
create_txt <- function(filename, type, software, exists) {
@ -70,6 +71,7 @@ download_txt <- function(filename) {
file.exists(feather),
file.exists(parquet),
file.exists(sas),
file.exists(xpt),
file.exists(spss),
file.exists(stata)
)) {
@ -80,7 +82,8 @@ download_txt <- function(filename) {
create_txt(excel, "xlsx", "Microsoft Excel workbook", file.exists(excel)),
create_txt(feather, "feather", "Apache Feather file", file.exists(feather)),
create_txt(parquet, "parquet", "Apache Parquet file", file.exists(parquet)),
create_txt(sas, "sas", "SAS data file", file.exists(sas)),
create_txt(sas, "sas", "SAS data (SAS) file", file.exists(sas)),
create_txt(xpt, "xpt", "SAS transport (XPT) file", file.exists(xpt)),
create_txt(spss, "sav", "IBM SPSS Statistics data file", file.exists(spss)),
create_txt(stata, "dta", "Stata DTA file", file.exists(stata))
)
@ -123,7 +126,7 @@ This data set is in R available as `microorganisms`, after you load the `AMR` pa
`r download_txt("microorganisms")`
**NOTE: The exported files for SAS, SPSS and Stata contain only the first 50 SNOMED codes per record, as their file size would otherwise exceed 100 MB; the file size limit of GitHub.** Advice? Use R instead.
**NOTE: The exported files for SAS, SPSS and Stata contain only the first 50 SNOMED codes per record, as their file size would otherwise exceed 100 MB; the file size limit of GitHub.** Their file structures and compression techniques are very inefficient. Advice? Use R instead. It's free and much better in many ways.
The tab-separated text file and Microsoft Excel workbook both contain all SNOMED codes as comma separated values.