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(v2.1.1.9120) unit test fix

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2024-12-15 20:32:55 +01:00
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9 changed files with 19 additions and 11 deletions

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# AMR 2.1.1.9118
# AMR 2.1.1.9120
*(this beta version will eventually become v3.0. We're happy to reach a new major milestone soon, which will be all about the new One Health support! Install this beta using [the instructions here](https://msberends.github.io/AMR/#latest-development-version).)*
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* Updated the prevalence calculation to include genera from the World Health Organization's (WHO) Priority Pathogen List
* Improved algorithm of `first_isolate()` when using the phenotype-based method, to prioritise records with the highest availability of SIR values
* `scale_y_percent()` can now cope with ranges outside the 0-100% range
* Support for new Dutch national MDRO guideline (SRI-richtlijn BRMO, Nov 2024)
## Other
* Greatly improved `vctrs` integration, a Tidyverse package working in the background for many Tidyverse functions. For users, this means that functions such as `dplyr`'s `bind_rows()`, `rowwise()` and `c_across()` are now supported for e.g. columns of class `mic`. Despite this, this `AMR` package is still zero-dependent on any other package, including `dplyr` and `vctrs`.