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more mic classes

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dr. M.S. (Matthijs) Berends 2018-07-28 10:48:27 +02:00
parent feab1cad6b
commit 8421e3f005
2 changed files with 9 additions and 0 deletions
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1
NEWS.md
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@ -47,6 +47,7 @@
* Fix for warning *hybrid evaluation forced for row_number* ([`924b62`](https://github.com/tidyverse/dplyr/commit/924b62)) from the `dplyr` package v0.7.5 and above
* Support for empty values and for 1 or 2 columns as input for `guess_bactid` (now called `as.bactid`)
* So `yourdata %>% select(genus, species) %>% as.bactid()` now also works
* Other small fixes
#### Other
* Unit testing for R 3.0 and the latest available release: https://travis-ci.org/msberends/AMR

8
R/classes.R
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@ -247,6 +247,7 @@ as.mic <- function(x, na.rm = FALSE) {
"<0.006", "<=0.006", "0.006", ">=0.006", ">0.006",
"<0.008", "<=0.008", "0.008", ">=0.008", ">0.008",
"<0.012", "<=0.012", "0.012", ">=0.012", ">0.012",
"<0.0125", "<=0.0125", "0.0125", ">=0.0125", ">0.0125",
"<0.016", "<=0.016", "0.016", ">=0.016", ">0.016",
"<0.023", "<=0.023", "0.023", ">=0.023", ">0.023",
"<0.025", "<=0.025", "0.025", ">=0.025", ">0.025",
@ -254,6 +255,7 @@ as.mic <- function(x, na.rm = FALSE) {
"<0.032", "<=0.032", "0.032", ">=0.032", ">0.032",
"<0.047", "<=0.047", "0.047", ">=0.047", ">0.047",
"<0.05", "<=0.05", "0.05", ">=0.05", ">0.05",
"<0.054", "<=0.054", "0.054", ">=0.054", ">0.054",
"<0.06", "<=0.06", "0.06", ">=0.06", ">0.06",
"<0.0625", "<=0.0625", "0.0625", ">=0.0625", ">0.0625",
"<0.063", "<=0.063", "0.063", ">=0.063", ">0.063",
@ -265,9 +267,13 @@ as.mic <- function(x, na.rm = FALSE) {
"<0.128", "<=0.128", "0.128", ">=0.128", ">0.128",
"<0.16", "<=0.16", "0.16", ">=0.16", ">0.16",
"<0.19", "<=0.19", "0.19", ">=0.19", ">0.19",
"<0.23", "<=0.23", "0.23", ">=0.23", ">0.23",
"<0.25", "<=0.25", "0.25", ">=0.25", ">0.25",
"<0.256", "<=0.256", "0.256", ">=0.256", ">0.256",
"<0.28", "<=0.28", "0.28", ">=0.28", ">0.28",
"<0.30", "<=0.30", "0.30", ">=0.30", ">0.30",
"<0.32", "<=0.32", "0.32", ">=0.32", ">0.32",
"<0.36", "<=0.36", "0.36", ">=0.36", ">0.36",
"<0.38", "<=0.38", "0.38", ">=0.38", ">0.38",
"<0.5", "<=0.5", "0.5", ">=0.5", ">0.5",
"<0.512", "<=0.512", "0.512", ">=0.512", ">0.512",
@ -278,7 +284,9 @@ as.mic <- function(x, na.rm = FALSE) {
"<2", "<=2", "2", ">=2", ">2",
"<3", "<=3", "3", ">=3", ">3",
"<4", "<=4", "4", ">=4", ">4",
"<5", "<=5", "5", ">=5", ">5",
"<6", "<=6", "6", ">=6", ">6",
"<7", "<=7", "7", ">=7", ">7",
"<8", "<=8", "8", ">=8", ">8",
"<10", "<=10", "10", ">=10", ">10",
"<12", "<=12", "12", ">=12", ">12",