From 8438e68df5398777ab99f7d431f66a91846d2915 Mon Sep 17 00:00:00 2001 From: github-actions <41898282+github-actions[bot]@users.noreply.github.com> Date: Sat, 22 Oct 2022 20:10:04 +0000 Subject: [PATCH] Built site for AMR: 1.8.2.9033@c2801ba --- 404.html | 2 +- LICENSE-text.html | 2 +- articles/AMR.html | 520 +++++++++--------- .../AMR_files/figure-html/disk_plots-1.png | Bin 38802 -> 39243 bytes .../figure-html/disk_plots_mo_ab-1.png | Bin 56817 -> 54896 bytes .../AMR_files/figure-html/mic_plots-1.png | Bin 28420 -> 28089 bytes .../AMR_files/figure-html/mic_plots-2.png | Bin 35866 -> 36460 bytes .../figure-html/mic_plots_mo_ab-1.png | Bin 38230 -> 38871 bytes .../figure-html/mic_plots_mo_ab-2.png | Bin 49200 -> 49975 bytes articles/AMR_files/figure-html/plot 1-1.png | Bin 43354 -> 43067 bytes articles/AMR_files/figure-html/plot 3-1.png | Bin 28427 -> 28459 bytes articles/AMR_files/figure-html/plot 4-1.png | Bin 78108 -> 78003 bytes articles/AMR_files/figure-html/plot 5-1.png | Bin 49896 -> 49852 bytes articles/EUCAST.html | 2 +- articles/MDR.html | 58 +- articles/PCA.html | 2 +- articles/SPSS.html | 2 +- articles/WHONET.html | 18 +- articles/datasets.html | 56 +- articles/index.html | 2 +- articles/resistance_predict.html | 2 +- articles/welcome_to_AMR.html | 4 +- authors.html | 2 +- index.html | 6 +- news/index.html | 20 +- pkgdown.yml | 2 +- reference/AMR-deprecated.html | 2 +- reference/AMR.html | 8 +- reference/Rplot005.png | Bin 13415 -> 13248 bytes reference/Rplot006.png | Bin 12945 -> 12790 bytes reference/Rplot007.png | Bin 13528 -> 12747 bytes reference/Rplot008.png | Bin 17004 -> 16721 bytes reference/Rplot009.png | Bin 8660 -> 8616 bytes reference/WHOCC.html | 2 +- reference/WHONET.html | 2 +- reference/ab_from_text.html | 2 +- reference/ab_property.html | 2 +- reference/add_custom_antimicrobials.html | 2 +- reference/age.html | 22 +- reference/age_groups.html | 2 +- reference/antibiotic_class_selectors.html | 2 +- reference/antibiotics.html | 2 +- reference/as.ab.html | 2 +- reference/as.disk.html | 2 +- reference/as.mic.html | 13 +- reference/as.mo.html | 2 +- reference/as.rsi.html | 43 +- reference/atc_online.html | 2 +- reference/availability.html | 2 +- reference/bug_drug_combinations.html | 6 +- reference/count.html | 2 +- reference/custom_eucast_rules.html | 2 +- reference/dosage.html | 2 +- reference/eucast_rules.html | 2 +- reference/example_isolates.html | 2 +- reference/example_isolates_unclean.html | 2 +- reference/first_isolate.html | 2 +- reference/g.test.html | 2 +- reference/get_episode.html | 128 ++--- reference/ggplot_pca.html | 2 +- reference/ggplot_rsi.html | 2 +- reference/guess_ab_col.html | 2 +- reference/index.html | 6 +- reference/intrinsic_resistant.html | 2 +- reference/italicise_taxonomy.html | 2 +- reference/join.html | 30 +- reference/key_antimicrobials.html | 2 +- reference/kurtosis.html | 6 +- reference/like.html | 2 +- reference/mdro.html | 2 +- reference/mean_amr_distance.html | 79 ++- reference/microorganisms.codes.html | 12 +- reference/microorganisms.html | 42 +- reference/mo_matching_score.html | 2 +- reference/mo_property.html | 2 +- reference/mo_source.html | 2 +- reference/pca.html | 2 +- reference/plot-1.png | Bin 26851 -> 26551 bytes reference/plot-2.png | Bin 27306 -> 27127 bytes reference/plot-3.png | Bin 27304 -> 27775 bytes reference/plot-4.png | Bin 38607 -> 38547 bytes reference/plot-5.png | Bin 39079 -> 38871 bytes reference/plot-6.png | Bin 37772 -> 37628 bytes reference/plot-7.png | Bin 37969 -> 34929 bytes reference/plot-8.png | Bin 53860 -> 52869 bytes reference/plot-9.png | Bin 26427 -> 26443 bytes reference/plot.html | 4 +- reference/proportion.html | 2 +- reference/random.html | 35 +- reference/resistance_predict.html | 2 +- reference/rsi_translation.html | 36 +- reference/skewness.html | 4 +- reference/translate.html | 2 +- search.json | 2 +- 94 files changed, 632 insertions(+), 618 deletions(-) diff --git a/404.html b/404.html index 9460d6ec..aa910b35 100644 --- a/404.html +++ b/404.html @@ -36,7 +36,7 @@ AMR (for R) - 1.8.2.9032 + 1.8.2.9033