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remove warnings from unit tests

This commit is contained in:
2022-10-19 11:47:57 +02:00
parent fed3b6440f
commit 85e2fbe4a3
35 changed files with 115 additions and 110 deletions

View File

@ -60,7 +60,7 @@ It has now created a file \code{"~/mo_source.rds"} with the contents of our Exce
And now we can use it in our functions:
\if{html}{\out{<div class="sourceCode">}}\preformatted{as.mo("lab_mo_ecoli")
#> Class <mo>
#> Class 'mo'
#> [1] B_ESCHR_COLI
mo_genus("lab_mo_kpneumoniae")
@ -70,7 +70,7 @@ mo_genus("lab_mo_kpneumoniae")
as.mo(c("Escherichia coli", "E. coli", "lab_mo_ecoli"))
#> NOTE: Translation to one microorganism was guessed with uncertainty.
#> Use mo_uncertainties() to review it.
#> Class <mo>
#> Class 'mo'
#> [1] B_ESCHR_COLI B_ESCHR_COLI B_ESCHR_COLI
}\if{html}{\out{</div>}}
@ -91,7 +91,7 @@ If we edit the Excel file by, let's say, adding row 4 like this:
#> NOTE: Updated mo_source file '/Users/me/mo_source.rds' (0.3 kB) from
#> '/Users/me/Documents/ourcodes.xlsx' (9 kB), columns
#> "Organisation XYZ" and "mo"
#> Class <mo>
#> Class 'mo'
#> [1] B_ESCHR_COLI
mo_genus("lab_Staph_aureus")