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reference/antimicrobials.md
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# Data Sets with 624 Antimicrobial Drugs
# Data Sets with 625 Antimicrobial Drugs
Two data sets containing all antimicrobials and antivirals. Use
[`as.ab()`](https://amr-for-r.org/reference/as.ab.md) or one of the
@@ -25,7 +25,7 @@ antivirals
## Format
### For the antimicrobials data set: a [tibble](https://tibble.tidyverse.org/reference/tibble.html) with 504 observations and 14 variables:
### For the antimicrobials data set: a [tibble](https://tibble.tidyverse.org/reference/tibble.html) with 505 observations and 14 variables:
- `ab`
antimicrobial ID as used in this package (such as `AMC`), using the
@@ -138,7 +138,7 @@ LOINC:
[`av_property()`](https://amr-for-r.org/reference/av_property.md).
An object of class `deprecated_amr_dataset` (inherits from `tbl_df`,
`tbl`, `data.frame`) with 504 rows and 14 columns.
`tbl`, `data.frame`) with 505 rows and 14 columns.
An object of class `tbl_df` (inherits from `tbl`, `data.frame`) with 120
rows and 11 columns.
@@ -219,9 +219,9 @@ unlike any other info from this package.** See
``` r
antimicrobials
#> # A tibble: 504 × 14
#> # A tibble: 505 × 14
#> ab cid name group atc atc_group1 atc_group2 abbreviations synonyms
#> <ab> <dbl> <chr> <lis> <lis> <chr> <chr> <list> <named >
#> <ab> <dbl> <chr> <lis> <lis> <chr> <chr> <list> <list>
#> 1 AMA 4649 4-ami… <chr> <chr> Drugs for… Aminosali… <chr [1]> <chr>
#> 2 ACM 6450012 Acety… <chr> <chr> NA NA <chr [1]> <chr>
#> 3 ASP 49787020 Acety… <chr> <chr> NA NA <chr [1]> <chr>
@@ -232,7 +232,7 @@ antimicrobials
#> 8 AMX 33613 Amoxi… <chr> <chr> Beta-lact… Penicilli… <chr [4]> <chr>
#> 9 AMC 23665637 Amoxi… <chr> <chr> Beta-lact… Combinati… <chr [6]> <chr>
#> 10 AXS 465441 Amoxi… <chr> <chr> NA NA <chr [1]> <chr>
#> # ℹ 494 more rows
#> # ℹ 495 more rows
#> # ℹ 5 more variables: oral_ddd <dbl>, oral_units <chr>, iv_ddd <dbl>,
#> # iv_units <chr>, loinc <list>
antivirals