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2024-12-07 19:12:04 +00:00
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reference/antibiotic_class_selectors.html
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@ -9,7 +9,7 @@ In short, if you have a column name that resembles an antimicrobial drug, it wil
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@ -285,7 +285,7 @@ In short, if you have a column name that resembles an antimicrobial drug, it wil
<span class="r-in"><span></span></span>
<span class="r-in"><span><span class="co"># you can combine selectors like you are used with tidyverse</span></span></span>
<span class="r-in"><span><span class="co"># e.g., for betalactams, but not the ones with an enzyme inhibitor:</span></span></span>
<span class="r-in"><span><span class="va">example_isolates</span> <span class="op">|&gt;</span> <span class="fu"><a href="https://dplyr.tidyverse.org/reference/select.html" class="external-link">select</a></span><span class="op">(</span><span class="fu">betalactams</span><span class="op">(</span><span class="op">)</span>, <span class="op">-</span><span class="fu">betalactams_with_inhibitor</span><span class="op">(</span><span class="op">)</span><span class="op">)</span></span></span>
<span class="r-in"><span><span class="va">example_isolates</span> <span class="op"><a href="https://magrittr.tidyverse.org/reference/pipe.html" class="external-link">%&gt;%</a></span> <span class="fu"><a href="https://dplyr.tidyverse.org/reference/select.html" class="external-link">select</a></span><span class="op">(</span><span class="fu">betalactams</span><span class="op">(</span><span class="op">)</span>, <span class="op">-</span><span class="fu">betalactams_with_inhibitor</span><span class="op">(</span><span class="op">)</span><span class="op">)</span></span></span>
<span class="r-msg co"><span class="r-pr">#&gt;</span> ℹ For betalactams() using columns 'PEN' (benzylpenicillin), 'OXA'</span>
<span class="r-msg co"><span class="r-pr">#&gt;</span> (oxacillin), 'FLC' (flucloxacillin), 'AMX' (amoxicillin), 'AMC'</span>
<span class="r-msg co"><span class="r-pr">#&gt;</span> (amoxicillin/clavulanic acid), 'AMP' (ampicillin), 'TZP'</span>