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(v2.1.1.9141) new AMR selectors, eucast overwrite arg
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@ -1,6 +1,6 @@
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Metadata-Version: 2.2
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Name: AMR
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Version: 2.1.1.9140
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Version: 2.1.1.9141
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Summary: A Python wrapper for the AMR R package
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Home-page: https://github.com/msberends/AMR
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Author: Matthijs Berends
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@ -45,9 +45,11 @@ from .functions import cephalosporins_4th
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from .functions import cephalosporins_5th
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from .functions import fluoroquinolones
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from .functions import glycopeptides
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from .functions import isoxazolylpenicillins
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from .functions import lincosamides
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from .functions import lipoglycopeptides
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from .functions import macrolides
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from .functions import monobactams
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from .functions import nitrofurans
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from .functions import oxazolidinones
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from .functions import penicillins
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@ -165,6 +165,9 @@ def fluoroquinolones(only_sir_columns = False, *args, **kwargs):
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def glycopeptides(only_sir_columns = False, *args, **kwargs):
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"""See our website of the R package for the manual: https://msberends.github.io/AMR/index.html"""
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return convert_to_python(amr_r.glycopeptides(only_sir_columns = False, *args, **kwargs))
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def isoxazolylpenicillins(only_sir_columns = False, *args, **kwargs):
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"""See our website of the R package for the manual: https://msberends.github.io/AMR/index.html"""
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return convert_to_python(amr_r.isoxazolylpenicillins(only_sir_columns = False, *args, **kwargs))
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def lincosamides(only_sir_columns = False, *args, **kwargs):
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"""See our website of the R package for the manual: https://msberends.github.io/AMR/index.html"""
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return convert_to_python(amr_r.lincosamides(only_sir_columns = False, *args, **kwargs))
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@ -174,6 +177,9 @@ def lipoglycopeptides(only_sir_columns = False, *args, **kwargs):
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def macrolides(only_sir_columns = False, *args, **kwargs):
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"""See our website of the R package for the manual: https://msberends.github.io/AMR/index.html"""
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return convert_to_python(amr_r.macrolides(only_sir_columns = False, *args, **kwargs))
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def monobactams(only_sir_columns = False, *args, **kwargs):
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"""See our website of the R package for the manual: https://msberends.github.io/AMR/index.html"""
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return convert_to_python(amr_r.monobactams(only_sir_columns = False, *args, **kwargs))
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def nitrofurans(only_sir_columns = False, *args, **kwargs):
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"""See our website of the R package for the manual: https://msberends.github.io/AMR/index.html"""
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return convert_to_python(amr_r.nitrofurans(only_sir_columns = False, *args, **kwargs))
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@ -2,7 +2,7 @@ from setuptools import setup, find_packages
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setup(
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name='AMR',
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version='2.1.1.9140',
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version='2.1.1.9141',
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packages=find_packages(),
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install_requires=[
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'rpy2',
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