mirror of
https://github.com/msberends/AMR.git
synced 2025-07-13 00:32:34 +02:00
Built site for AMR: 1.8.2.9067@6f4bb60
This commit is contained in:
github-actions
@ -10,7 +10,7 @@
|
||||
|
||||
<a class="navbar-brand me-2" href="../index.html">AMR (for R)</a>
|
||||
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">1.8.2.9066</small>
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">1.8.2.9067</small>
|
||||
|
||||
|
||||
<button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
|
||||
@ -183,44 +183,43 @@
|
||||
<h2 id="ref-examples">Examples<a class="anchor" aria-label="anchor" href="#ref-examples"></a></h2>
|
||||
<div class="sourceCode"><pre class="sourceCode r"><code><span class="r-in"><span><span class="fu">random_mic</span><span class="op">(</span><span class="fl">25</span><span class="op">)</span></span></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> Class 'mic'</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] 1 8 8 8 0.25 0.25 0.025 0.01 0.002 0.01 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [11] >=64 0.5 2 1 0.01 0.0625 1 0.5 >=64 0.025 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [21] 0.005 0.001 >=64 1 16 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] 256 128 1 1 256 1 4 0.025 1 0.125 0.002 256 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [13] 32 0.001 0.001 0.002 16 0.025 0.002 16 8 4 4 8 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [25] 0.001</span>
|
||||
<span class="r-in"><span><span class="fu">random_disk</span><span class="op">(</span><span class="fl">25</span><span class="op">)</span></span></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> Class 'disk'</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] 23 48 36 18 46 48 41 40 42 42 46 8 45 50 32 37 50 22 20 34 25 9 8 30 45</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] 47 47 17 39 50 23 19 41 43 35 22 45 23 45 15 48 22 36 12 33 39 47 8 14 45</span>
|
||||
<span class="r-in"><span><span class="fu">random_rsi</span><span class="op">(</span><span class="fl">25</span><span class="op">)</span></span></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> Class 'rsi'</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] I R S R R R I S R R S R S I S S I S R S I I R I R</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] R S I I S R S S I S R R S S S I R I S S S I I S I</span>
|
||||
<span class="r-in"><span></span></span>
|
||||
<span class="r-in"><span><span class="co"># \donttest{</span></span></span>
|
||||
<span class="r-in"><span><span class="co"># make the random generation more realistic by setting a bug and/or drug:</span></span></span>
|
||||
<span class="r-in"><span><span class="fu">random_mic</span><span class="op">(</span><span class="fl">25</span>, <span class="st">"Klebsiella pneumoniae"</span><span class="op">)</span> <span class="co"># range 0.0625-64</span></span></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> Class 'mic'</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] 0.002 64 0.125 64 1 0.125 0.002 >=256 4 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [10] 4 0.125 64 >=256 1 1 32 <=0.001 1 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [19] 0.5 0.01 0.002 <=0.001 0.01 0.25 0.5 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] 0.25 0.01 0.005 8 1 128 0.125 32 0.5 0.01 0.005 64 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [13] 4 0.125 0.125 8 16 128 8 256 0.001 0.125 128 0.025</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [25] 16 </span>
|
||||
<span class="r-in"><span><span class="fu">random_mic</span><span class="op">(</span><span class="fl">25</span>, <span class="st">"Klebsiella pneumoniae"</span>, <span class="st">"meropenem"</span><span class="op">)</span> <span class="co"># range 0.0625-16</span></span></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> Class 'mic'</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] 16 64 4 64 32 8 4 2 4 8 16 4 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [13] 4 1 32 2 4 64 16 64 <=0.5 8 4 64 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [25] 2 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] 32 4 0.5 4 2 16 1 8 1 0.5 4 0.5 4 32 16 32 0.5 8 8 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [20] 16 4 1 8 1 16 </span>
|
||||
<span class="r-in"><span><span class="fu">random_mic</span><span class="op">(</span><span class="fl">25</span>, <span class="st">"Streptococcus pneumoniae"</span>, <span class="st">"meropenem"</span><span class="op">)</span> <span class="co"># range 0.0625-4</span></span></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> Class 'mic'</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] 2 0.125 0.5 0.25 0.25 0.125 2 <=0.0625</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [9] 0.25 >=4 0.5 0.25 0.5 2 1 1 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [17] 0.25 <=0.0625 0.125 <=0.0625 0.25 0.5 2 1 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [25] 0.125 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] 16 8 16 16 8 16 8 <=0.0625</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [9] 1 <=0.0625 0.25 0.25 16 8 1 16 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [17] 0.125 <=0.0625 1 0.25 16 <=0.0625 2 1 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [25] 2 </span>
|
||||
<span class="r-in"><span></span></span>
|
||||
<span class="r-in"><span><span class="fu">random_disk</span><span class="op">(</span><span class="fl">25</span>, <span class="st">"Klebsiella pneumoniae"</span><span class="op">)</span> <span class="co"># range 8-50</span></span></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> Class 'disk'</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] 31 18 17 13 25 50 33 11 43 28 47 34 32 30 10 48 13 11 44 40 46 8 32 19 19</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] 46 39 20 40 25 36 19 24 44 49 13 35 23 12 25 18 30 26 48 37 50 35 15 35 42</span>
|
||||
<span class="r-in"><span><span class="fu">random_disk</span><span class="op">(</span><span class="fl">25</span>, <span class="st">"Klebsiella pneumoniae"</span>, <span class="st">"ampicillin"</span><span class="op">)</span> <span class="co"># range 11-17</span></span></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> Class 'disk'</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] 15 16 11 12 11 16 12 11 11 11 14 17 12 14 14 16 16 16 16 17 13 17 15 11 14</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] 13 13 14 16 14 12 12 12 13 11 11 17 16 15 13 14 11 11 15 15 13 13 13 13 14</span>
|
||||
<span class="r-in"><span><span class="fu">random_disk</span><span class="op">(</span><span class="fl">25</span>, <span class="st">"Streptococcus pneumoniae"</span>, <span class="st">"ampicillin"</span><span class="op">)</span> <span class="co"># range 12-27</span></span></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> Class 'disk'</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] 25 17 21 26 26 15 18 19 24 23 20 24 18 18 25 24 17 17 25 15 16 20 15 27 21</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] 21 16 23 24 22 19 15 24 17 24 16 19 15 17 15 26 15 26 21 22 15 20 20 23 18</span>
|
||||
<span class="r-in"><span><span class="co"># }</span></span></span>
|
||||
</code></pre></div>
|
||||
</div>
|
||||
|
||||
Reference in New Issue
Block a user