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(v3.0.0.9007) allow any tidyselect language in as.sir()

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dr. M.S. (Matthijs) Berends
2025-07-17 14:29:35 +02:00
parent 0138e33ce9
commit 8dab0a3730
16 changed files with 123 additions and 113 deletions
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man/mean_amr_distance.Rd
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@ -18,7 +18,7 @@ amr_distance_from_row(amr_distance, row)
\arguments{
\item{x}{A vector of class \link[=as.sir]{sir}, \link[=as.mic]{mic} or \link[=as.disk]{disk}, or a \link{data.frame} containing columns of any of these classes.}
\item{...}{Variables to select. Supports \link[tidyselect:language]{tidyselect language} (such as \code{column1:column4} and \code{where(is.mic)}), and can thus also be \link[=amr_selector]{antimicrobial selectors}.}
\item{...}{Variables to select. Supports \link[tidyselect:starts_with]{tidyselect language} such as \code{where(is.mic)}, \code{starts_with(...)}, or \code{column1:column4}, and can thus also be \link[=amr_selector]{antimicrobial selectors}.}
\item{combine_SI}{A \link{logical} to indicate whether all values of S, SDD, and I must be merged into one, so the input only consists of S+I vs. R (susceptible vs. resistant) - the default is \code{TRUE}.}