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(v1.7.1.9007) Updated antibiotics dataset, fixes #41

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dr. M.S. (Matthijs) Berends
2021-06-23 10:03:17 +02:00
parent 1dc9d237f6
commit 95050ee3e0
34 changed files with 91 additions and 86 deletions
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NEWS.md
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# `AMR` 1.7.1.9006
## <small>Last updated: 22 June 2021</small>
# `AMR` 1.7.1.9007
## <small>Last updated: 23 June 2021</small>
### Changed
* Antibiotic class selectors (see `ab_class()`)
* They now finally also work in R-3.0 and R-3.1, supporting every version of R since 2013
* Added more selectors: `aminopenicillins()`, `lincosamides()`, `lipoglycopeptides()`, `polymyxins()`, `quinolones()`, `streptogramins()` and `ureidopenicillins()`
* Fix for using selectors multiple times in one call (e.g., using them in `dplyr::filter()` and immediately after in `dplyr::select()`)
* Fixed duplicate ATC codes in the `antibiotics` data set
* Added `ggplot2::autoplot()` generic for classes `<mic>`, `<disk>`, `<rsi>` and `<resistance_predict>`
* Fix to prevent introducing `NA`s for old MO codes when running `as.mo()` on them
* Added more informative error messages when any of the `proportion_*()` and `count_*()` functions fail