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(v2.1.1.9226) update intrinsic_resistant, unit test fixes

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dr. M.S. (Matthijs) Berends
2025-03-27 15:20:22 +01:00
parent e6f88241b2
commit 969a42cc8c
29 changed files with 139318 additions and 244254 deletions
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3
tests/testthat/test-eucast_rules.R
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@ -47,7 +47,8 @@ test_that("test-eucast_rules.R", {
MOs_test <- suppressWarnings(
trimws(paste(
mo_genus(MOs_mentioned, keep_synonyms = TRUE, language = NULL),
mo_species(MOs_mentioned, keep_synonyms = TRUE, language = NULL)
mo_species(MOs_mentioned, keep_synonyms = TRUE, language = NULL),
mo_subspecies(MOs_mentioned, keep_synonyms = TRUE, language = NULL)
))
)
MOs_test[MOs_test == ""] <- mo_fullname(MOs_mentioned[MOs_test == ""], keep_synonyms = TRUE, language = NULL)