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ab_* functions, mo_* functions, 180 new microorganisms, speed improvement for bactid

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dr. M.S. (Matthijs) Berends committed 2018-08-28 13:51:13 +02:00
1 parent 2acdb1981c
commit 972fc4f6c7
24 files changed
+571 -306
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NAMESPACE
+18 -15
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@@ -36,30 +36,22 @@ export(EUCAST_exceptional_phenotypes)
export(EUCAST_rules)
export(MDRO)
export(MRGN)
export(ab_atc)
export(ab_certe)
export(ab_official)
export(ab_official_nl)
export(ab_property)
export(ab_trivial_nl)
export(ab_umcg)
export(abname)
export(anti_join_microorganisms)
export(as.atc)
export(as.bactid)
export(as.mic)
export(as.rsi)
export(atc.certe)
export(atc.official)
export(atc.official_nl)
export(atc.trivial_nl)
export(atc.umcg)
export(atc_ddd)
export(atc_groups)
export(atc_property)
export(bactid.aerobic)
export(bactid.family)
export(bactid.fullname)
export(bactid.genus)
export(bactid.gramstain)
export(bactid.gramstain_nl)
export(bactid.species)
export(bactid.subspecies)
export(bactid.type)
export(bactid.type_nl)
export(clipboard_export)
export(clipboard_import)
export(count_I)
@@ -90,6 +82,17 @@ export(key_antibiotics_equal)
export(kurtosis)
export(left_join_microorganisms)
export(like)
export(mo_aerobic)
export(mo_family)
export(mo_fullname)
export(mo_genus)
export(mo_gramstain)
export(mo_gramstain_nl)
export(mo_property)
export(mo_species)
export(mo_subspecies)
export(mo_type)
export(mo_type_nl)
export(n_rsi)
export(p.symbol)
export(portion_I)