From 97df961c58132cb3a98835d3f6b8e05115d69ad4 Mon Sep 17 00:00:00 2001 From: github-actions <41898282+github-actions[bot]@users.noreply.github.com> Date: Thu, 13 Feb 2025 18:57:22 +0000 Subject: [PATCH] Built site for AMR@2.1.1.9146: bd2887b --- 404.html | 2 +- LICENSE-text.html | 2 +- articles/AMR.html | 10 +- articles/AMR_for_Python.html | 2 +- articles/AMR_with_tidymodels.html | 6 +- articles/EUCAST.html | 2 +- articles/MDR.html | 2 +- articles/PCA.html | 2 +- articles/WHONET.html | 5 +- articles/datasets.html | 4 +- articles/index.html | 2 +- articles/resistance_predict.html | 2 +- articles/welcome_to_AMR.html | 2 +- authors.html | 2 +- index.html | 4 +- news/index.html | 21 +-- pkgdown.yml | 2 +- reference/AMR-deprecated.html | 2 +- reference/AMR-options.html | 2 +- reference/AMR.html | 2 +- reference/WHOCC.html | 2 +- reference/WHONET.html | 2 +- reference/ab_from_text.html | 2 +- reference/ab_property.html | 2 +- reference/add_custom_antimicrobials.html | 2 +- reference/add_custom_microorganisms.html | 2 +- reference/age.html | 22 +-- reference/age_groups.html | 5 +- reference/antibiogram.html | 2 +- reference/antibiotics.html | 2 +- reference/antimicrobial_class_selectors.html | 2 +- reference/as.ab.html | 2 +- reference/as.av.html | 2 +- reference/as.disk.html | 2 +- reference/as.mic.html | 2 +- reference/as.mo.html | 2 +- reference/as.sir.html | 22 +-- reference/atc_online.html | 2 +- reference/av_from_text.html | 2 +- reference/av_property.html | 2 +- reference/availability.html | 2 +- reference/bug_drug_combinations.html | 2 +- reference/clinical_breakpoints.html | 2 +- reference/count.html | 2 +- reference/custom_eucast_rules.html | 2 +- reference/dosage.html | 2 +- reference/eucast_rules.html | 2 +- reference/example_isolates.html | 2 +- reference/example_isolates_unclean.html | 2 +- reference/export_ncbi_biosample.html | 2 +- reference/first_isolate.html | 2 +- reference/g.test.html | 2 +- reference/get_episode.html | 2 +- reference/ggplot_pca.html | 2 +- reference/ggplot_sir.html | 7 +- reference/guess_ab_col.html | 2 +- reference/index.html | 4 +- reference/intrinsic_resistant.html | 2 +- reference/italicise_taxonomy.html | 2 +- reference/join.html | 2 +- reference/key_antimicrobials.html | 2 +- reference/kurtosis.html | 2 +- reference/like.html | 2 +- reference/mdro.html | 2 +- reference/mean_amr_distance.html | 2 +- reference/microorganisms.codes.html | 2 +- reference/microorganisms.groups.html | 2 +- reference/microorganisms.html | 2 +- reference/mo_matching_score.html | 2 +- reference/mo_property.html | 2 +- reference/mo_source.html | 2 +- reference/pca.html | 2 +- reference/plot-15.png | Bin 36353 -> 72166 bytes reference/plot-16.png | Bin 53905 -> 36353 bytes reference/plot-17.png | Bin 24287 -> 53905 bytes reference/plot-18.png | Bin 28723 -> 24287 bytes reference/plot-19.png | Bin 19541 -> 28723 bytes reference/plot-20.png | Bin 29791 -> 19541 bytes reference/plot-21.png | Bin 0 -> 29791 bytes reference/plot.html | 142 ++++++++++++++---- reference/proportion.html | 2 +- reference/random.html | 35 +++-- reference/resistance_predict.html | 2 +- ...ortify.disk.html => scale_colour_sir.html} | 0 .../{fortify.mic.html => scale_fill_sir.html} | 0 .../{fortify.sir.html => scale_x_sir.html} | 0 reference/skewness.html | 4 +- reference/top_n_microorganisms.html | 2 +- reference/translate.html | 2 +- search.json | 2 +- 90 files changed, 254 insertions(+), 169 deletions(-) create mode 100644 reference/plot-21.png rename reference/{fortify.disk.html => scale_colour_sir.html} (100%) rename reference/{fortify.mic.html => scale_fill_sir.html} (100%) rename reference/{fortify.sir.html => scale_x_sir.html} (100%) diff --git a/404.html b/404.html index 6e7a39632..025394568 100644 --- a/404.html +++ b/404.html @@ -32,7 +32,7 @@ AMR (for R) - 2.1.1.9144 + 2.1.1.9146