P281424/AMR
1
0
Fork 0
mirror of https://github.com/msberends/AMR.git synced 2025-09-02 18:24:09 +02:00
Code Releases Activity

Replace RSI with SIR

Browse Source
This commit is contained in:
Dr. Matthijs Berends
2023-01-21 23:47:20 +01:00
committed by GitHub
parent 24b12024ce
commit 98e62c9af2
127 changed files with 1746 additions and 1648 deletions
Download Patch File Download Diff File Expand all files Collapse all files

6
R/aa_globals.R
View File

@@ -27,7 +27,7 @@
# how to conduct AMR data analysis: https://msberends.github.io/AMR/ #
# ==================================================================== #
# add new version numbers here, and add the rules themselves to "data-raw/eucast_rules.tsv" and rsi_translation
# add new version numbers here, and add the rules themselves to "data-raw/eucast_rules.tsv" and clinical_breakpoints
# (sourcing "data-raw/_pre_commit_hook.R" will process the TSV file)
EUCAST_VERSION_BREAKPOINTS <- list(
"12.0" = list(
@@ -148,8 +148,8 @@ globalVariables(c(
"reference.rule_group",
"reference.version",
"rowid",
"rsi",
"rsi_translation",
"sir",
"clinical_breakpoints",
"rule_group",
"rule_name",
"se_max",