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Replace RSI with SIR

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This commit is contained in:
Dr. Matthijs Berends
2023-01-21 23:47:20 +01:00
committed by GitHub
parent 24b12024ce
commit 98e62c9af2
127 changed files with 1746 additions and 1648 deletions
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R/ggplot_pca.R
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@ -76,7 +76,7 @@
#' genus = mo_genus(mo)
#' ) %>% # and genus as we do here;
#' filter(n() >= 30) %>% # filter on only 30 results per group
#' summarise_if(is.rsi, resistance) # then get resistance of all drugs
#' summarise_if(is.sir, resistance) # then get resistance of all drugs
#'
#' # now conduct PCA for certain antimicrobial drugs
#' pca_result <- resistance_data %>%