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Replace RSI with SIR

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This commit is contained in:
Dr. Matthijs Berends
2023-01-21 23:47:20 +01:00
committed by GitHub
parent 24b12024ce
commit 98e62c9af2
127 changed files with 1746 additions and 1648 deletions
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4
man/guess_ab_col.Rd
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@ -8,7 +8,7 @@ guess_ab_col(
x = NULL,
search_string = NULL,
verbose = FALSE,
only_rsi_columns = FALSE
only_sir_columns = FALSE
)
}
\arguments{
@ -18,7 +18,7 @@ guess_ab_col(
\item{verbose}{a \link{logical} to indicate whether additional info should be printed}
\item{only_rsi_columns}{a \link{logical} to indicate whether only antibiotic columns must be detected that were transformed to class \code{rsi} (see \code{\link[=as.rsi]{as.rsi()}}) on beforehand (defaults to \code{FALSE})}
\item{only_sir_columns}{a \link{logical} to indicate whether only antibiotic columns must be detected that were transformed to class \code{sir} (see \code{\link[=as.sir]{as.sir()}}) on beforehand (defaults to \code{FALSE})}
}
\value{
A column name of \code{x}, or \code{NULL} when no result is found.