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(v2.1.1.9182) fix AMR selectors for tidymodels, add unit tests

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dr. M.S. (Matthijs) Berends
2025-03-03 12:59:27 +01:00
parent b85890449d
commit 9a9468fa84
16 changed files with 84 additions and 33 deletions
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R/sir.R
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@ -539,7 +539,7 @@ as.sir.default <- function(x,
cur_col <- get_current_column()
warning_("in `as.sir()`: ", na_after - na_before, " result",
ifelse(na_after - na_before > 1, "s", ""),
ifelse(is.null(cur_col), "", paste0(" in column '", cur_col, "'")),
ifelse(is.null(cur_col), "", paste0(" in index '", cur_col, "'")),
" truncated (",
round(((na_after - na_before) / length(x)) * 100),
"%) that were invalid antimicrobial interpretations: ",