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(v2.1.1.9148) scale fix, antibiogram fix

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dr. M.S. (Matthijs) Berends
2025-02-15 12:38:29 +01:00
parent d94efb0f5e
commit 9d636983ac
12 changed files with 68 additions and 34 deletions
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6
tests/testthat/test-antibiogram.R
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@ -104,7 +104,7 @@ ab8 <- suppressWarnings(antibiogram(example_isolates,
wisca = TRUE))
expect_inherits(ab8, "antibiogram")
expect_equal(colnames(ab8), c("Pathogen", "Piperacillin/tazobactam", "Piperacillin/tazobactam + Gentamicin", "Piperacillin/tazobactam + Tobramycin"))
expect_equal(colnames(ab8), c("Piperacillin/tazobactam", "Piperacillin/tazobactam + Gentamicin", "Piperacillin/tazobactam + Tobramycin"))
# grouped tibbles
@ -128,7 +128,7 @@ expect_silent(plot(ab5))
expect_silent(plot(ab6))
expect_silent(plot(ab7))
expect_silent(plot(ab8))
expect_error(plot(ab9))
expect_silent(plot(ab9))
if (AMR:::pkg_is_available("ggplot2")) {
expect_inherits(ggplot2::autoplot(ab1), "gg")
@ -139,5 +139,5 @@ if (AMR:::pkg_is_available("ggplot2")) {
expect_inherits(ggplot2::autoplot(ab6), "gg")
expect_inherits(ggplot2::autoplot(ab7), "gg")
expect_inherits(ggplot2::autoplot(ab8), "gg")
expect_error(ggplot2::autoplot(ab9))
expect_inherits(ggplot2::autoplot(ab9), "gg")
}