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support A. species for as.mo, cleanup

This commit is contained in:
2018-11-24 20:25:09 +01:00
parent 63ba4b2980
commit 9ddf6dc530
14 changed files with 126 additions and 93 deletions

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@ -347,10 +347,8 @@ key_antibiotics(...)
# Selection of first isolates of any patient
first_isolate(...)
# Calculate resistance levels of antibiotics, can be used with `summarise` (dplyr)
rsi(...)
# Predict resistance levels of antibiotics
rsi_predict(...)
resistance_predict(...)
# Get name of antibiotic by ATC code
abname(...)