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use dplyr where available, new antibiogram() for WISCA, fixed Salmonella Typhi/Paratyphi

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dr. M.S. (Matthijs) Berends
2023-02-06 11:57:22 +01:00
parent 4b133d4c96
commit 9e99e66f01
69 changed files with 1670 additions and 650 deletions
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5
R/translate.R
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@ -244,9 +244,10 @@ translate_into_language <- function(from,
if (NROW(df_trans) == 0 | !any_form_in_patterns) {
return(from)
}
lapply(
seq_len(nrow(df_trans)),
# starting from last row, since more general translation are on top, such as 'Group'
rev(seq_len(nrow(df_trans))),
function(i) {
from_unique_translated <<- gsub(
pattern = df_trans$pattern[i],