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(v1.6.0.9028) new unit test flow

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This commit is contained in:
dr. M.S. (Matthijs) Berends
2021-05-13 22:44:11 +02:00
parent 5b9fb8daf4
commit 9ed2f6490f
31 changed files with 108 additions and 99 deletions
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4
tests/testthat/test-eucast_rules.R
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@ -77,7 +77,7 @@ test_that("EUCAST rules work", {
expect_equal(suppressWarnings(eucast_rules(a, "mo", info = FALSE)), b)
# piperacillin must be R in Enterobacteriaceae when tica is R
if (require("dplyr")) {
if (suppressWarnings(require("dplyr"))) {
expect_equal(suppressWarnings(
example_isolates %>%
filter(mo_family(mo) == "Enterobacteriaceae") %>%
@ -115,7 +115,7 @@ test_that("EUCAST rules work", {
"S")
# also test norf
if (require("dplyr")) {
if (suppressWarnings(require("dplyr"))) {
expect_output(suppressWarnings(eucast_rules(example_isolates %>% mutate(NOR = "S", NAL = "S"), info = TRUE)))
}