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unit tests

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dr. M.S. (Matthijs) Berends
2023-01-05 14:43:18 +01:00
parent 77d9cf1936
commit a0ee86536a
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R/custom_eucast_rules.R
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@@ -77,7 +77,7 @@
#'
#' ### Using taxonomic properties in rules
#'
#' There is one exception in variables used for the rules: all column names of the [microorganisms] data set can also be used, but do not have to exist in the data set. These column names are: `r vector_and(colnames(microorganisms), sort = FALSE)`. Thus, this next example will work as well, despite the fact that the `df` data set does not contain a column `genus`:
#' There is one exception in columns used for the rules: all column names of the [microorganisms] data set can also be used, but do not have to exist in the data set. These column names are: `r vector_and(colnames(microorganisms), sort = FALSE)`. Thus, this next example will work as well, despite the fact that the `df` data set does not contain a column `genus`:
#'
#' ```r
#' y <- custom_eucast_rules(TZP == "S" & genus == "Klebsiella" ~ aminopenicillins == "S",