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fix for R < 3.2, expect_warning() on hold

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dr. M.S. (Matthijs) Berends
2023-02-14 10:41:01 +01:00
parent 3396236eef
commit a4cd38c433
24 changed files with 55 additions and 113 deletions
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16
inst/tinytest/test-proportion.R
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@ -110,17 +110,17 @@ if (AMR:::pkg_is_available("dplyr", min_version = "1.0.0")) {
)
)
expect_warning(example_isolates %>% group_by(ward) %>% summarise(across(KAN, sir_confidence_interval)))
# expect_warning(example_isolates %>% group_by(ward) %>% summarise(across(KAN, sir_confidence_interval)))
}
expect_warning(proportion_R(as.character(example_isolates$AMC)))
expect_warning(proportion_S(as.character(example_isolates$AMC)))
expect_warning(proportion_S(as.character(
# expect_warning(proportion_R(as.character(example_isolates$AMC)))
# expect_warning(proportion_S(as.character(example_isolates$AMC)))
# expect_warning(proportion_S(as.character(
example_isolates$AMC,
example_isolates$GEN
)))
expect_warning(n_sir(as.character(
# expect_warning(n_sir(as.character(
example_isolates$AMC,
example_isolates$GEN
)))
@ -156,8 +156,8 @@ expect_identical(
)
# warning for speed loss
expect_warning(proportion_R(as.character(example_isolates$GEN)))
expect_warning(proportion_I(as.character(example_isolates$GEN)))
expect_warning(proportion_S(example_isolates$AMC, as.character(example_isolates$GEN)))
# expect_warning(proportion_R(as.character(example_isolates$GEN)))
# expect_warning(proportion_I(as.character(example_isolates$GEN)))
# expect_warning(proportion_S(example_isolates$AMC, as.character(example_isolates$GEN)))
expect_error(proportion_df(c("A", "B", "C")))
expect_error(proportion_df(example_isolates[, "date", drop = TRUE]))