Built site for AMR@2.1.1.9094: 9450137

2024-12-25 18:46:11 +01:00 · 2024-10-10 14:45:12 +00:00 · 2024-10-10 14:45:12 +00:00 · a9017a57bd
commit a9017a57bd
parent ee18760cfa
80 changed files with 859 additions and 239 deletions
--- a/404.html
+++ b/404.html
@ -30,7 +30,7 @@
    <a class="navbar-brand me-2" href="https://msberends.github.io/AMR/index.html">AMR (for R)</a>
-    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9093</small>
+    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9094</small>
    <button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
--- a/AMRforRGPT_python.svg
+++ b/AMRforRGPT_python.svg
--- a/LICENSE-text.html
+++ b/LICENSE-text.html
@ -7,7 +7,7 @@
    <a class="navbar-brand me-2" href="index.html">AMR (for R)</a>
-    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9093</small>
+    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9094</small>
    <button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
--- a/articles/AMR.html
+++ b/articles/AMR.html
@ -29,7 +29,7 @@
    <a class="navbar-brand me-2" href="../index.html">AMR (for R)</a>
-    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9093</small>
+    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9094</small>
    <button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
@ -87,7 +87,7 @@
 website update since they are based on randomly created values and the
 page was written in <a href="https://rmarkdown.rstudio.com/" class="external-link">R
 Markdown</a>. However, the methodology remains unchanged. This page was
-generated on 06 October 2024.</p>
+generated on 10 October 2024.</p>
 <div class="section level2">
 <h2 id="introduction">Introduction<a class="anchor" aria-label="anchor" href="#introduction"></a>
 </h2>
@ -143,21 +143,21 @@ make the structure of your data generally look like this:</p>
 </tr></thead>
 <tbody>
 <tr class="odd">
-<td align="center">2024-10-06</td>
+<td align="center">2024-10-10</td>
 <td align="center">abcd</td>
 <td align="center">Escherichia coli</td>
 <td align="center">S</td>
 <td align="center">S</td>
 </tr>
 <tr class="even">
-<td align="center">2024-10-06</td>
+<td align="center">2024-10-10</td>
 <td align="center">abcd</td>
 <td align="center">Escherichia coli</td>
 <td align="center">S</td>
 <td align="center">R</td>
 </tr>
 <tr class="odd">
-<td align="center">2024-10-06</td>
+<td align="center">2024-10-10</td>
 <td align="center">efgh</td>
 <td align="center">Escherichia coli</td>
 <td align="center">R</td>
--- a/articles/AMR_for_Python.html
+++ b/articles/AMR_for_Python.html
@ -29,7 +29,7 @@
    <a class="navbar-brand me-2" href="../index.html">AMR (for R)</a>
-    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9093</small>
+    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9094</small>
    <button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
--- a/articles/EUCAST.html
+++ b/articles/EUCAST.html
@ -29,7 +29,7 @@
    <a class="navbar-brand me-2" href="../index.html">AMR (for R)</a>
-    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9093</small>
+    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9094</small>
    <button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
--- a/articles/MDR.html
+++ b/articles/MDR.html
@ -29,7 +29,7 @@
    <a class="navbar-brand me-2" href="../index.html">AMR (for R)</a>
-    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9093</small>
+    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9094</small>
    <button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
--- a/articles/PCA.html
+++ b/articles/PCA.html
@ -29,7 +29,7 @@
    <a class="navbar-brand me-2" href="../index.html">AMR (for R)</a>
-    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9093</small>
+    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9094</small>
    <button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
--- a/articles/WHONET.html
+++ b/articles/WHONET.html
@ -29,7 +29,7 @@
    <a class="navbar-brand me-2" href="../index.html">AMR (for R)</a>
-    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9093</small>
+    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9094</small>
    <button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
--- a/articles/datasets.html
+++ b/articles/datasets.html
@ -29,7 +29,7 @@
    <a class="navbar-brand me-2" href="../index.html">AMR (for R)</a>
-    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9093</small>
+    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9094</small>
    <button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
@ -76,7 +76,7 @@
  <main id="main" class="col-md-9"><div class="page-header">
      <img src="../logo.svg" class="logo" alt=""><h1>Data sets for download / own use</h1>
-            <h4 data-toc-skip class="date">06 October 2024</h4>
+            <h4 data-toc-skip class="date">10 October 2024</h4>
      <small class="dont-index">Source: <a href="https://github.com/msberends/AMR/blob/main/vignettes/datasets.Rmd" class="external-link"><code>vignettes/datasets.Rmd</code></a></small>
      <div class="d-none name"><code>datasets.Rmd</code></div>
@ -444,18 +444,18 @@ column names:<br><em>ab</em>, <em>cid</em>, <em>name</em>, <em>group</em>, <em>a
 <em>iv_ddd</em>, <em>iv_units</em>, and <em>loinc</em>.</p>
 <p>This data set is in R available as <code>antibiotics</code>, after
 you load the <code>AMR</code> package.</p>
-<p>It was last updated on 6 October 2024 20:30:52 UTC. Find more info
+<p>It was last updated on 10 October 2024 14:38:20 UTC. Find more info
 about the structure of this data set <a href="https://msberends.github.io/AMR/reference/antibiotics.html">here</a>.</p>
 <p><strong>Direct download links:</strong></p>
 <ul>
 <li>Download as <a href="https://github.com/msberends/AMR/raw/main/data-raw/../data-raw/antibiotics.rds" class="external-link">original
-R Data Structure (RDS) file</a> (49 kB)<br>
+R Data Structure (RDS) file</a> (44 kB)<br>
 </li>
 <li>Download as <a href="https://github.com/msberends/AMR/raw/main/data-raw/../data-raw/antibiotics.txt" class="external-link">tab-separated
 text file</a> (0.1 MB)<br>
 </li>
 <li>Download as <a href="https://github.com/msberends/AMR/raw/main/data-raw/../data-raw/antibiotics.xlsx" class="external-link">Microsoft
-Excel workbook</a> (82 kB)<br>
+Excel workbook</a> (75 kB)<br>
 </li>
 <li>Download as <a href="https://github.com/msberends/AMR/raw/main/data-raw/../data-raw/antibiotics.feather" class="external-link">Apache
 Feather file</a> (0.1 MB)<br>
@ -505,7 +505,7 @@ Names and Codes)</a></li>
 <col width="12%">
 <col width="17%">
 <col width="6%">
-<col width="14%">
+<col width="13%">
 <col width="2%">
 <col width="3%">
 <col width="2%">
@ -538,7 +538,7 @@ Names and Codes)</a></li>
 <td align="center">Aminoglycoside antibacterials</td>
 <td align="center">Other aminoglycosides</td>
 <td align="center">ak, ami, amik, …</td>
-<td align="center">ambutyrosin a, ambutyrosin b, ambuyrosin a, …</td>
+<td align="center">amicacin, amikacillin, amikacin, …</td>
 <td align="center"></td>
 <td align="center"></td>
 <td align="center">1.0</td>
@ -554,7 +554,7 @@ Names and Codes)</a></li>
 <td align="center">Beta-lactam antibacterials, penicillins</td>
 <td align="center">Penicillins with extended spectrum</td>
 <td align="center">ac, amox, amx</td>
-<td align="center">actimoxi, acuotricina, agram, …</td>
+<td align="center">actimoxi, amoclen, amolin, …</td>
 <td align="center">1.5</td>
 <td align="center">g</td>
 <td align="center">3.0</td>
@ -619,7 +619,7 @@ inhibitors</td>
 <td align="center">Combinations of antibacterials</td>
 <td align="center">Combinations of antibacterials</td>
 <td align="center">bepe, pen, peni, …</td>
-<td align="center">abbocillin, amcap, amcill, …</td>
+<td align="center">abbocillin, ayercillin, bencilpenicilina, …</td>
 <td align="center"></td>
 <td align="center"></td>
 <td align="center">3.6</td>
--- a/articles/index.html
+++ b/articles/index.html
@ -7,7 +7,7 @@
    <a class="navbar-brand me-2" href="../index.html">AMR (for R)</a>
-    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9093</small>
+    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9094</small>
    <button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
--- a/articles/other_pkg.html
+++ b/articles/other_pkg.html
@ -29,7 +29,7 @@
    <a class="navbar-brand me-2" href="../index.html">AMR (for R)</a>
-    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9093</small>
+    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9094</small>
    <button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
--- a/articles/resistance_predict.html
+++ b/articles/resistance_predict.html
@ -29,7 +29,7 @@
    <a class="navbar-brand me-2" href="../index.html">AMR (for R)</a>
-    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9093</small>
+    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9094</small>
    <button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
--- a/articles/welcome_to_AMR.html
+++ b/articles/welcome_to_AMR.html
@ -29,7 +29,7 @@
    <a class="navbar-brand me-2" href="../index.html">AMR (for R)</a>
-    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9093</small>
+    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9094</small>
    <button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
--- a/authors.html
+++ b/authors.html
@ -7,7 +7,7 @@
    <a class="navbar-brand me-2" href="index.html">AMR (for R)</a>
-    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9093</small>
+    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9094</small>
    <button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
--- a/extra.js
+++ b/extra.js
@ -59,8 +59,9 @@ $(document).ready(function() {
  // make Python part more fancy - prepare for CSS
  if (window.location.href.includes('AMR_for_Python')) {
-    $('body').addClass('amr-for-python');
+    $('body').addClass('amr-for-python'); /* to set colours in CSS */
-    $('img[src="../logo.svg"]').attr('src', '../logo_python.svg');
+    $('img[src="../logo.svg"]').attr('src', '../logo_python.svg'); /* replace base logo */
    $('img[src="https://github.com/msberends/AMR/raw/main/pkgdown/assets/AMRforRGPT.svg"]').attr('src', 'https://github.com/msberends/AMR/raw/main/pkgdown/assets/AMRforRGPT_python.svg'); /* replace GPT logo */
  }
  // add doctoral titles to authors
--- a/index.html
+++ b/index.html
@ -32,7 +32,7 @@
    <a class="navbar-brand me-2" href="index.html">AMR (for R)</a>
-    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9093</small>
+    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9094</small>
    <button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
--- a/news/index.html
+++ b/news/index.html
@ -7,7 +7,7 @@
    <a class="navbar-brand me-2" href="../index.html">AMR (for R)</a>
-    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9093</small>
+    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9094</small>
    <button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
@ -47,18 +47,18 @@
    </div>
    <div class="section level2">
-<h2 class="pkg-version" data-toc-text="2.1.1.9093" id="amr-2119093">AMR 2.1.1.9093<a class="anchor" aria-label="anchor" href="#amr-2119093"></a></h2>
+<h2 class="pkg-version" data-toc-text="2.1.1.9094" id="amr-2119094">AMR 2.1.1.9094<a class="anchor" aria-label="anchor" href="#amr-2119094"></a></h2>
 <p><em>(this beta version will eventually become v3.0. We’re happy to reach a new major milestone soon, which will be all about the new One Health support! Install this beta using <a href="https://msberends.github.io/AMR/#latest-development-version">the instructions here</a>.)</em></p>
 <div class="section level5">
-<h5 id="a-new-milestone-amr-v30-with-one-health-support--human--veterinary--environmental-2-1-1-9093">A New Milestone: AMR v3.0 with One Health Support (= Human + Veterinary + Environmental)<a class="anchor" aria-label="anchor" href="#a-new-milestone-amr-v30-with-one-health-support--human--veterinary--environmental-2-1-1-9093"></a></h5>
+<h5 id="a-new-milestone-amr-v30-with-one-health-support--human--veterinary--environmental-2-1-1-9094">A New Milestone: AMR v3.0 with One Health Support (= Human + Veterinary + Environmental)<a class="anchor" aria-label="anchor" href="#a-new-milestone-amr-v30-with-one-health-support--human--veterinary--environmental-2-1-1-9094"></a></h5>
 <p>This package now supports not only tools for AMR data analysis in clinical settings, but also for veterinary and environmental microbiology. This was made possible through a collaboration with the <a href="https://www.upei.ca/avc" class="external-link">University of Prince Edward Island’s Atlantic Veterinary College</a>, Canada. To celebrate this great improvement of the package, we also updated the package logo to reflect this change.</p>
 </div>
 <div class="section level3">
-<h3 id="breaking-2-1-1-9093">Breaking<a class="anchor" aria-label="anchor" href="#breaking-2-1-1-9093"></a></h3>
+<h3 id="breaking-2-1-1-9094">Breaking<a class="anchor" aria-label="anchor" href="#breaking-2-1-1-9094"></a></h3>
 <ul><li>Removed all functions and references that used the deprecated <code>rsi</code> class, which were all replaced with their <code>sir</code> equivalents over a year ago</li>
 </ul></div>
 <div class="section level3">
-<h3 id="new-2-1-1-9093">New<a class="anchor" aria-label="anchor" href="#new-2-1-1-9093"></a></h3>
+<h3 id="new-2-1-1-9094">New<a class="anchor" aria-label="anchor" href="#new-2-1-1-9094"></a></h3>
 <ul><li>
 <strong>One Health implementation</strong>
 <ul><li>Function <code><a href="../reference/as.sir.html">as.sir()</a></code> now has extensive support for veterinary breakpoints from CLSI. Use <code>breakpoint_type = "animal"</code> and set the <code>host</code> argument to a variable that contains animal species names.</li>
@ -95,7 +95,7 @@
 </ul></li>
 </ul></div>
 <div class="section level3">
-<h3 id="changed-2-1-1-9093">Changed<a class="anchor" aria-label="anchor" href="#changed-2-1-1-9093"></a></h3>
+<h3 id="changed-2-1-1-9094">Changed<a class="anchor" aria-label="anchor" href="#changed-2-1-1-9094"></a></h3>
 <ul><li>SIR interpretation
 <ul><li>It is now possible to use column names for argument <code>ab</code>, <code>mo</code>, and <code>uti</code>: <code>as.sir(..., ab = "column1", mo = "column2", uti = "column3")</code>. This greatly improves the flexibility for users.</li>
 <li>Users can now set their own criteria (using regular expressions) as to what should be considered S, I, R, SDD, and NI.</li>
@ -147,14 +147,14 @@
 <li>Improved algorithm of <code><a href="../reference/first_isolate.html">first_isolate()</a></code> when using the phenotype-based method, to prioritise records with the highest availability of SIR values</li>
 </ul></div>
 <div class="section level3">
-<h3 id="other-2-1-1-9093">Other<a class="anchor" aria-label="anchor" href="#other-2-1-1-9093"></a></h3>
+<h3 id="other-2-1-1-9094">Other<a class="anchor" aria-label="anchor" href="#other-2-1-1-9094"></a></h3>
 <ul><li>Greatly improved <code>vctrs</code> integration, a Tidyverse package working in the background for many Tidyverse functions. For users, this means that functions such as <code>dplyr</code>’s <code><a href="https://dplyr.tidyverse.org/reference/bind_rows.html" class="external-link">bind_rows()</a></code>, <code><a href="https://dplyr.tidyverse.org/reference/rowwise.html" class="external-link">rowwise()</a></code> and <code><a href="https://dplyr.tidyverse.org/reference/c_across.html" class="external-link">c_across()</a></code> are now supported for e.g. columns of class <code>mic</code>. Despite this, this <code>AMR</code> package is still zero-dependent on any other package, including <code>dplyr</code> and <code>vctrs</code>.</li>
 <li>Greatly updated and expanded documentation</li>
 <li>Added Larisse Bolton, Jordan Stull, Matthew Saab, and Javier Sanchez as contributors, to thank them for their valuable input</li>
 <li>Stopped support for SAS (<code>.xpt</code>) files, since their file structure and extremely inefficient and requires more disk space than GitHub allows in a single commit.</li>
 </ul></div>
 <div class="section level3">
-<h3 id="older-versions-2-1-1-9093">Older Versions<a class="anchor" aria-label="anchor" href="#older-versions-2-1-1-9093"></a></h3>
+<h3 id="older-versions-2-1-1-9094">Older Versions<a class="anchor" aria-label="anchor" href="#older-versions-2-1-1-9094"></a></h3>
 <p>This changelog only contains changes from AMR v3.0 (October 2024) and later.</p>
 <ul><li>For prior v2 versions, please see <a href="https://github.com/msberends/AMR/blob/v2.1.1/NEWS.md" class="external-link">our v2 archive</a>.</li>
 <li>For prior v1 versions, please see <a href="https://github.com/msberends/AMR/blob/v1.8.2/NEWS.md" class="external-link">our v1 archive</a>.</li>
--- a/pkgdown.yml
+++ b/pkgdown.yml
@ -12,7 +12,7 @@ articles:
  resistance_predict: resistance_predict.html
  welcome_to_AMR: welcome_to_AMR.html
  WHONET: WHONET.html
-last_built: 2024-10-06T20:50Z
+last_built: 2024-10-10T14:41Z
 urls:
  reference: https://msberends.github.io/AMR/reference
  article: https://msberends.github.io/AMR/articles
--- a/reference/AMR-options.html
+++ b/reference/AMR-options.html
@ -7,7 +7,7 @@
    <a class="navbar-brand me-2" href="../index.html">AMR (for R)</a>
-    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9093</small>
+    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9094</small>
    <button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
--- a/reference/AMR.html
+++ b/reference/AMR.html
@ -21,7 +21,7 @@ The AMR package is available in English, Chinese, Czech, Danish, Dutch, Finnish,
    <a class="navbar-brand me-2" href="../index.html">AMR (for R)</a>
-    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9093</small>
+    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9094</small>
    <button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
--- a/reference/WHOCC.html
+++ b/reference/WHOCC.html
@ -7,7 +7,7 @@
    <a class="navbar-brand me-2" href="../index.html">AMR (for R)</a>
-    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9093</small>
+    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9094</small>
    <button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
@ -71,17 +71,10 @@
 <span class="r-out co"><span class="r-pr">#&gt;</span> [1] "Meropenem"</span>
 <span class="r-in"><span></span></span>
 <span class="r-in"><span><span class="fu"><a href="ab_property.html">ab_tradenames</a></span><span class="op">(</span><span class="st">"flucloxacillin"</span><span class="op">)</span></span></span>
-<span class="r-out co"><span class="r-pr">#&gt;</span>  [1] "ankerbin"             "austrastaph"          "bactopen"            </span>
+<span class="r-out co"><span class="r-pr">#&gt;</span>  [1] "culpen"               "floxacillin"          "floxacillin sodium"  </span>
-<span class="r-out co"><span class="r-pr">#&gt;</span>  [4] "cloxacap"             "cloxacillinanhydrous" "cloxacillinhydrate"  </span>
+<span class="r-out co"><span class="r-pr">#&gt;</span>  [4] "floxapen"             "floxapen sodium salt" "fluclox"             </span>
-<span class="r-out co"><span class="r-pr">#&gt;</span>  [7] "cloxacillinsalt"      "cloxapen"             "cloxypen"            </span>
+<span class="r-out co"><span class="r-pr">#&gt;</span>  [7] "flucloxacilina"       "flucloxacillin"       "flucloxacilline"     </span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> [10] "culpen"               "dariclox"             "ekvacillin"          </span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> [10] "flucloxacillinum"     "fluorochloroxacillin" "staphylex"           </span>
 <span class="r-out co"><span class="r-pr">#&gt;</span> [13] "floxacillin"          "floxapen"             "floxapen sodium salt"</span>
 <span class="r-out co"><span class="r-pr">#&gt;</span> [16] "fluclox"              "flucloxacilina"       "flucloxacilline"     </span>
 <span class="r-out co"><span class="r-pr">#&gt;</span> [19] "flucloxacillinum"     "fluorochloroxacillin" "gelstaph"            </span>
 <span class="r-out co"><span class="r-pr">#&gt;</span> [22] "latocillin"           "orbenin"              "orbeninhydrate"      </span>
 <span class="r-out co"><span class="r-pr">#&gt;</span> [25] "prevencilina p"       "prostaphilin a"       "prostaphlin a"       </span>
 <span class="r-out co"><span class="r-pr">#&gt;</span> [28] "staphybiotic"         "staphylex"            "syntarpensalt"       </span>
 <span class="r-out co"><span class="r-pr">#&gt;</span> [31] "tegopen"             </span>
 </code></pre></div>
    </div>
  </main><aside class="col-md-3"><nav id="toc" aria-label="Table of contents"><h2>On this page</h2>
--- a/reference/WHONET.html
+++ b/reference/WHONET.html
@ -7,7 +7,7 @@
    <a class="navbar-brand me-2" href="../index.html">AMR (for R)</a>
-    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9093</small>
+    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9094</small>
    <button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
--- a/reference/ab_from_text.html
+++ b/reference/ab_from_text.html
@ -7,7 +7,7 @@
    <a class="navbar-brand me-2" href="../index.html">AMR (for R)</a>
-    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9093</small>
+    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9094</small>
    <button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
--- a/reference/ab_property.html
+++ b/reference/ab_property.html
@ -7,7 +7,7 @@
    <a class="navbar-brand me-2" href="../index.html">AMR (for R)</a>
-    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9093</small>
+    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9094</small>
    <button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
@ -177,79 +177,45 @@
 <span class="r-in"><span><span class="fu">ab_cid</span><span class="op">(</span><span class="st">"AMX"</span><span class="op">)</span></span></span>
 <span class="r-out co"><span class="r-pr">#&gt;</span> [1] 33613</span>
 <span class="r-in"><span><span class="fu">ab_synonyms</span><span class="op">(</span><span class="st">"AMX"</span><span class="op">)</span></span></span>
-<span class="r-out co"><span class="r-pr">#&gt;</span>   [1] "actimoxi"           "acuotricina"        "agram"             </span>
+<span class="r-out co"><span class="r-pr">#&gt;</span>  [1] "actimoxi"            "amoclen"             "amolin"             </span>
-<span class="r-out co"><span class="r-pr">#&gt;</span>   [4] "alfamox"            "alfida"             "alfoxil enjektabl" </span>
+<span class="r-out co"><span class="r-pr">#&gt;</span>  [4] "amopen"              "amopenixin"          "amoxibiotic"        </span>
-<span class="r-out co"><span class="r-pr">#&gt;</span>   [7] "amitron"            "amoclen"            "amodex"            </span>
+<span class="r-out co"><span class="r-pr">#&gt;</span>  [7] "amoxicaps"           "amoxicilina"         "amoxicillin"        </span>
-<span class="r-out co"><span class="r-pr">#&gt;</span>  [10] "amoksicillin"       "amoksicillin forte" "amolin"            </span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> [10] "amoxicillin hydrate" "amoxicilline"        "amoxicillinum"      </span>
-<span class="r-out co"><span class="r-pr">#&gt;</span>  [13] "amopen"             "amopenixin"         "amophar"           </span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> [13] "amoxiden"            "amoxil"              "amoxivet"           </span>
-<span class="r-out co"><span class="r-pr">#&gt;</span>  [16] "amoran"             "amoxibiotic"        "amoxicaps"         </span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> [16] "amoxy"               "amoxycillin"         "amoxyke"            </span>
-<span class="r-out co"><span class="r-pr">#&gt;</span>  [19] "amoxicilina"        "amoxicillin pulsys" "amoxicilline"      </span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> [19] "anemolin"            "aspenil"             "atoksilin"          </span>
-<span class="r-out co"><span class="r-pr">#&gt;</span>  [22] "amoxicillinsalt"    "amoxicillinum"      "amoxidal"          </span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> [22] "biomox"              "bristamox"           "cemoxin"            </span>
-<span class="r-out co"><span class="r-pr">#&gt;</span>  [25] "amoxiden"           "amoxil"             "amoxil trihydrate" </span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> [25] "clamoxyl"            "damoxy"              "delacillin"         </span>
-<span class="r-out co"><span class="r-pr">#&gt;</span>  [28] "amoxillat"          "amoxina"            "amoxine"           </span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> [28] "demoksil"            "dispermox"           "efpenix"            </span>
-<span class="r-out co"><span class="r-pr">#&gt;</span>  [31] "amoxipen"           "amoxivet"           "amoxy"             </span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> [31] "flemoxin"            "hiconcil"            "histocillin"        </span>
-<span class="r-out co"><span class="r-pr">#&gt;</span>  [34] "amoxycillin"        "amoxyke"            "anemolin"          </span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> [34] "hydroxyampicillin"   "ibiamox"             "imacillin"          </span>
-<span class="r-out co"><span class="r-pr">#&gt;</span>  [37] "aspenil"            "atoksilin"          "biomox"            </span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> [37] "lamoxy"              "largopen"            "metafarma capsules" </span>
-<span class="r-out co"><span class="r-pr">#&gt;</span>  [40] "bristamox"          "cemoxin"            "ciblor"            </span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> [40] "metifarma capsules"  "moksilin"            "moxacin"            </span>
-<span class="r-out co"><span class="r-pr">#&gt;</span>  [43] "clamoxyl"           "damoxy"             "danoxillin"        </span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> [43] "moxatag"             "ospamox"             "pamoxicillin"       </span>
-<span class="r-out co"><span class="r-pr">#&gt;</span>  [46] "delacillin"         "demoksil"           "dispermox"         </span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> [46] "piramox"             "promoxil"            "remoxil"            </span>
-<span class="r-out co"><span class="r-pr">#&gt;</span>  [49] "dura"               "efpenix"            "eupen"             </span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> [49] "robamox"             "sawamox pm"          "tolodina"           </span>
-<span class="r-out co"><span class="r-pr">#&gt;</span>  [52] "flemoxin"           "flemoxine"          "galenamox"         </span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> [52] "topramoxin"          "unicillin"           "utimox"             </span>
-<span class="r-out co"><span class="r-pr">#&gt;</span>  [55] "gramidil"           "hiconcil"           "himinomax"         </span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> [55] "vetramox"           </span>
 <span class="r-out co"><span class="r-pr">#&gt;</span>  [58] "histocillin"        "hydroxyampicillin"  "ibiamox"           </span>
 <span class="r-out co"><span class="r-pr">#&gt;</span>  [61] "imacillin"          "izoltil"            "kentrocyllin"      </span>
 <span class="r-out co"><span class="r-pr">#&gt;</span>  [64] "lamoxy"             "largopen"           "larotid"           </span>
 <span class="r-out co"><span class="r-pr">#&gt;</span>  [67] "matasedrin"         "metafarma capsules" "metifarma"         </span>
 <span class="r-out co"><span class="r-pr">#&gt;</span>  [70] "metifarma capsules" "moksilin"           "moxacin"           </span>
 <span class="r-out co"><span class="r-pr">#&gt;</span>  [73] "moxaline"           "moxatag"            "neotetranase"      </span>
 <span class="r-out co"><span class="r-pr">#&gt;</span>  [76] "novabritine"        "ospamox"            "pacetocin"         </span>
 <span class="r-out co"><span class="r-pr">#&gt;</span>  [79] "pamocil"            "pamoxicillin"       "paradroxil"        </span>
 <span class="r-out co"><span class="r-pr">#&gt;</span>  [82] "pasetocin"          "penamox"            "piramox"           </span>
 <span class="r-out co"><span class="r-pr">#&gt;</span>  [85] "promoxil"           "quimiopen"          "remoxil"           </span>
 <span class="r-out co"><span class="r-pr">#&gt;</span>  [88] "riotapen"           "robamox"            "sawacillin"        </span>
 <span class="r-out co"><span class="r-pr">#&gt;</span>  [91] "sawamox"            "siganopen"          "simplamox"         </span>
 <span class="r-out co"><span class="r-pr">#&gt;</span>  [94] "sintopen"           "tolodina"           "topramoxin"        </span>
 <span class="r-out co"><span class="r-pr">#&gt;</span>  [97] "trifamox"           "trimox"             "unicillin"         </span>
 <span class="r-out co"><span class="r-pr">#&gt;</span> [100] "utimox"             "velamox"            "vetramox"          </span>
 <span class="r-out co"><span class="r-pr">#&gt;</span> [103] "wymox"              "zamocillin"         "zamocilline"       </span>
 <span class="r-out co"><span class="r-pr">#&gt;</span> [106] "zimox"             </span>
 <span class="r-in"><span><span class="fu">ab_tradenames</span><span class="op">(</span><span class="st">"AMX"</span><span class="op">)</span></span></span>
-<span class="r-out co"><span class="r-pr">#&gt;</span>   [1] "actimoxi"           "acuotricina"        "agram"             </span>
+<span class="r-out co"><span class="r-pr">#&gt;</span>  [1] "actimoxi"            "amoclen"             "amolin"             </span>
-<span class="r-out co"><span class="r-pr">#&gt;</span>   [4] "alfamox"            "alfida"             "alfoxil enjektabl" </span>
+<span class="r-out co"><span class="r-pr">#&gt;</span>  [4] "amopen"              "amopenixin"          "amoxibiotic"        </span>
-<span class="r-out co"><span class="r-pr">#&gt;</span>   [7] "amitron"            "amoclen"            "amodex"            </span>
+<span class="r-out co"><span class="r-pr">#&gt;</span>  [7] "amoxicaps"           "amoxicilina"         "amoxicillin"        </span>
-<span class="r-out co"><span class="r-pr">#&gt;</span>  [10] "amoksicillin"       "amoksicillin forte" "amolin"            </span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> [10] "amoxicillin hydrate" "amoxicilline"        "amoxicillinum"      </span>
-<span class="r-out co"><span class="r-pr">#&gt;</span>  [13] "amopen"             "amopenixin"         "amophar"           </span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> [13] "amoxiden"            "amoxil"              "amoxivet"           </span>
-<span class="r-out co"><span class="r-pr">#&gt;</span>  [16] "amoran"             "amoxibiotic"        "amoxicaps"         </span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> [16] "amoxy"               "amoxycillin"         "amoxyke"            </span>
-<span class="r-out co"><span class="r-pr">#&gt;</span>  [19] "amoxicilina"        "amoxicillin pulsys" "amoxicilline"      </span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> [19] "anemolin"            "aspenil"             "atoksilin"          </span>
-<span class="r-out co"><span class="r-pr">#&gt;</span>  [22] "amoxicillinsalt"    "amoxicillinum"      "amoxidal"          </span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> [22] "biomox"              "bristamox"           "cemoxin"            </span>
-<span class="r-out co"><span class="r-pr">#&gt;</span>  [25] "amoxiden"           "amoxil"             "amoxil trihydrate" </span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> [25] "clamoxyl"            "damoxy"              "delacillin"         </span>
-<span class="r-out co"><span class="r-pr">#&gt;</span>  [28] "amoxillat"          "amoxina"            "amoxine"           </span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> [28] "demoksil"            "dispermox"           "efpenix"            </span>
-<span class="r-out co"><span class="r-pr">#&gt;</span>  [31] "amoxipen"           "amoxivet"           "amoxy"             </span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> [31] "flemoxin"            "hiconcil"            "histocillin"        </span>
-<span class="r-out co"><span class="r-pr">#&gt;</span>  [34] "amoxycillin"        "amoxyke"            "anemolin"          </span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> [34] "hydroxyampicillin"   "ibiamox"             "imacillin"          </span>
-<span class="r-out co"><span class="r-pr">#&gt;</span>  [37] "aspenil"            "atoksilin"          "biomox"            </span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> [37] "lamoxy"              "largopen"            "metafarma capsules" </span>
-<span class="r-out co"><span class="r-pr">#&gt;</span>  [40] "bristamox"          "cemoxin"            "ciblor"            </span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> [40] "metifarma capsules"  "moksilin"            "moxacin"            </span>
-<span class="r-out co"><span class="r-pr">#&gt;</span>  [43] "clamoxyl"           "damoxy"             "danoxillin"        </span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> [43] "moxatag"             "ospamox"             "pamoxicillin"       </span>
-<span class="r-out co"><span class="r-pr">#&gt;</span>  [46] "delacillin"         "demoksil"           "dispermox"         </span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> [46] "piramox"             "promoxil"            "remoxil"            </span>
-<span class="r-out co"><span class="r-pr">#&gt;</span>  [49] "dura"               "efpenix"            "eupen"             </span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> [49] "robamox"             "sawamox pm"          "tolodina"           </span>
-<span class="r-out co"><span class="r-pr">#&gt;</span>  [52] "flemoxin"           "flemoxine"          "galenamox"         </span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> [52] "topramoxin"          "unicillin"           "utimox"             </span>
-<span class="r-out co"><span class="r-pr">#&gt;</span>  [55] "gramidil"           "hiconcil"           "himinomax"         </span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> [55] "vetramox"           </span>
 <span class="r-out co"><span class="r-pr">#&gt;</span>  [58] "histocillin"        "hydroxyampicillin"  "ibiamox"           </span>
 <span class="r-out co"><span class="r-pr">#&gt;</span>  [61] "imacillin"          "izoltil"            "kentrocyllin"      </span>
 <span class="r-out co"><span class="r-pr">#&gt;</span>  [64] "lamoxy"             "largopen"           "larotid"           </span>
 <span class="r-out co"><span class="r-pr">#&gt;</span>  [67] "matasedrin"         "metafarma capsules" "metifarma"         </span>
 <span class="r-out co"><span class="r-pr">#&gt;</span>  [70] "metifarma capsules" "moksilin"           "moxacin"           </span>
 <span class="r-out co"><span class="r-pr">#&gt;</span>  [73] "moxaline"           "moxatag"            "neotetranase"      </span>
 <span class="r-out co"><span class="r-pr">#&gt;</span>  [76] "novabritine"        "ospamox"            "pacetocin"         </span>
 <span class="r-out co"><span class="r-pr">#&gt;</span>  [79] "pamocil"            "pamoxicillin"       "paradroxil"        </span>
 <span class="r-out co"><span class="r-pr">#&gt;</span>  [82] "pasetocin"          "penamox"            "piramox"           </span>
 <span class="r-out co"><span class="r-pr">#&gt;</span>  [85] "promoxil"           "quimiopen"          "remoxil"           </span>
 <span class="r-out co"><span class="r-pr">#&gt;</span>  [88] "riotapen"           "robamox"            "sawacillin"        </span>
 <span class="r-out co"><span class="r-pr">#&gt;</span>  [91] "sawamox"            "siganopen"          "simplamox"         </span>
 <span class="r-out co"><span class="r-pr">#&gt;</span>  [94] "sintopen"           "tolodina"           "topramoxin"        </span>
 <span class="r-out co"><span class="r-pr">#&gt;</span>  [97] "trifamox"           "trimox"             "unicillin"         </span>
 <span class="r-out co"><span class="r-pr">#&gt;</span> [100] "utimox"             "velamox"            "vetramox"          </span>
 <span class="r-out co"><span class="r-pr">#&gt;</span> [103] "wymox"              "zamocillin"         "zamocilline"       </span>
 <span class="r-out co"><span class="r-pr">#&gt;</span> [106] "zimox"             </span>
 <span class="r-in"><span><span class="fu">ab_group</span><span class="op">(</span><span class="st">"AMX"</span><span class="op">)</span></span></span>
 <span class="r-out co"><span class="r-pr">#&gt;</span> [1] "Beta-lactams/penicillins"</span>
 <span class="r-in"><span><span class="fu">ab_atc_group1</span><span class="op">(</span><span class="st">"AMX"</span><span class="op">)</span></span></span>
@ -299,42 +265,25 @@
 <span class="r-out co"><span class="r-pr">#&gt;</span> [1] "Penicillins with extended spectrum"</span>
 <span class="r-out co"><span class="r-pr">#&gt;</span> </span>
 <span class="r-out co"><span class="r-pr">#&gt;</span> $tradenames</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span>   [1] "actimoxi"           "acuotricina"        "agram"             </span>
+<span class="r-out co"><span class="r-pr">#&gt;</span>  [1] "actimoxi"            "amoclen"             "amolin"             </span>
-<span class="r-out co"><span class="r-pr">#&gt;</span>   [4] "alfamox"            "alfida"             "alfoxil enjektabl" </span>
+<span class="r-out co"><span class="r-pr">#&gt;</span>  [4] "amopen"              "amopenixin"          "amoxibiotic"        </span>
-<span class="r-out co"><span class="r-pr">#&gt;</span>   [7] "amitron"            "amoclen"            "amodex"            </span>
+<span class="r-out co"><span class="r-pr">#&gt;</span>  [7] "amoxicaps"           "amoxicilina"         "amoxicillin"        </span>
-<span class="r-out co"><span class="r-pr">#&gt;</span>  [10] "amoksicillin"       "amoksicillin forte" "amolin"            </span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> [10] "amoxicillin hydrate" "amoxicilline"        "amoxicillinum"      </span>
-<span class="r-out co"><span class="r-pr">#&gt;</span>  [13] "amopen"             "amopenixin"         "amophar"           </span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> [13] "amoxiden"            "amoxil"              "amoxivet"           </span>
-<span class="r-out co"><span class="r-pr">#&gt;</span>  [16] "amoran"             "amoxibiotic"        "amoxicaps"         </span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> [16] "amoxy"               "amoxycillin"         "amoxyke"            </span>
-<span class="r-out co"><span class="r-pr">#&gt;</span>  [19] "amoxicilina"        "amoxicillin pulsys" "amoxicilline"      </span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> [19] "anemolin"            "aspenil"             "atoksilin"          </span>
-<span class="r-out co"><span class="r-pr">#&gt;</span>  [22] "amoxicillinsalt"    "amoxicillinum"      "amoxidal"          </span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> [22] "biomox"              "bristamox"           "cemoxin"            </span>
-<span class="r-out co"><span class="r-pr">#&gt;</span>  [25] "amoxiden"           "amoxil"             "amoxil trihydrate" </span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> [25] "clamoxyl"            "damoxy"              "delacillin"         </span>
-<span class="r-out co"><span class="r-pr">#&gt;</span>  [28] "amoxillat"          "amoxina"            "amoxine"           </span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> [28] "demoksil"            "dispermox"           "efpenix"            </span>
-<span class="r-out co"><span class="r-pr">#&gt;</span>  [31] "amoxipen"           "amoxivet"           "amoxy"             </span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> [31] "flemoxin"            "hiconcil"            "histocillin"        </span>
-<span class="r-out co"><span class="r-pr">#&gt;</span>  [34] "amoxycillin"        "amoxyke"            "anemolin"          </span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> [34] "hydroxyampicillin"   "ibiamox"             "imacillin"          </span>
-<span class="r-out co"><span class="r-pr">#&gt;</span>  [37] "aspenil"            "atoksilin"          "biomox"            </span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> [37] "lamoxy"              "largopen"            "metafarma capsules" </span>
-<span class="r-out co"><span class="r-pr">#&gt;</span>  [40] "bristamox"          "cemoxin"            "ciblor"            </span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> [40] "metifarma capsules"  "moksilin"            "moxacin"            </span>
-<span class="r-out co"><span class="r-pr">#&gt;</span>  [43] "clamoxyl"           "damoxy"             "danoxillin"        </span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> [43] "moxatag"             "ospamox"             "pamoxicillin"       </span>
-<span class="r-out co"><span class="r-pr">#&gt;</span>  [46] "delacillin"         "demoksil"           "dispermox"         </span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> [46] "piramox"             "promoxil"            "remoxil"            </span>
-<span class="r-out co"><span class="r-pr">#&gt;</span>  [49] "dura"               "efpenix"            "eupen"             </span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> [49] "robamox"             "sawamox pm"          "tolodina"           </span>
-<span class="r-out co"><span class="r-pr">#&gt;</span>  [52] "flemoxin"           "flemoxine"          "galenamox"         </span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> [52] "topramoxin"          "unicillin"           "utimox"             </span>
-<span class="r-out co"><span class="r-pr">#&gt;</span>  [55] "gramidil"           "hiconcil"           "himinomax"         </span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> [55] "vetramox"           </span>
 <span class="r-out co"><span class="r-pr">#&gt;</span>  [58] "histocillin"        "hydroxyampicillin"  "ibiamox"           </span>
 <span class="r-out co"><span class="r-pr">#&gt;</span>  [61] "imacillin"          "izoltil"            "kentrocyllin"      </span>
 <span class="r-out co"><span class="r-pr">#&gt;</span>  [64] "lamoxy"             "largopen"           "larotid"           </span>
 <span class="r-out co"><span class="r-pr">#&gt;</span>  [67] "matasedrin"         "metafarma capsules" "metifarma"         </span>
 <span class="r-out co"><span class="r-pr">#&gt;</span>  [70] "metifarma capsules" "moksilin"           "moxacin"           </span>
 <span class="r-out co"><span class="r-pr">#&gt;</span>  [73] "moxaline"           "moxatag"            "neotetranase"      </span>
 <span class="r-out co"><span class="r-pr">#&gt;</span>  [76] "novabritine"        "ospamox"            "pacetocin"         </span>
 <span class="r-out co"><span class="r-pr">#&gt;</span>  [79] "pamocil"            "pamoxicillin"       "paradroxil"        </span>
 <span class="r-out co"><span class="r-pr">#&gt;</span>  [82] "pasetocin"          "penamox"            "piramox"           </span>
 <span class="r-out co"><span class="r-pr">#&gt;</span>  [85] "promoxil"           "quimiopen"          "remoxil"           </span>
 <span class="r-out co"><span class="r-pr">#&gt;</span>  [88] "riotapen"           "robamox"            "sawacillin"        </span>
 <span class="r-out co"><span class="r-pr">#&gt;</span>  [91] "sawamox"            "siganopen"          "simplamox"         </span>
 <span class="r-out co"><span class="r-pr">#&gt;</span>  [94] "sintopen"           "tolodina"           "topramoxin"        </span>
 <span class="r-out co"><span class="r-pr">#&gt;</span>  [97] "trifamox"           "trimox"             "unicillin"         </span>
 <span class="r-out co"><span class="r-pr">#&gt;</span> [100] "utimox"             "velamox"            "vetramox"          </span>
 <span class="r-out co"><span class="r-pr">#&gt;</span> [103] "wymox"              "zamocillin"         "zamocilline"       </span>
 <span class="r-out co"><span class="r-pr">#&gt;</span> [106] "zimox"             </span>
 <span class="r-out co"><span class="r-pr">#&gt;</span> </span>
 <span class="r-out co"><span class="r-pr">#&gt;</span> $loinc</span>
 <span class="r-out co"><span class="r-pr">#&gt;</span>  [1] "101498-4" "15-8"     "16-6"     "16365-9"  "17-4"     "18-2"    </span>
--- a/reference/add_custom_antimicrobials.html
+++ b/reference/add_custom_antimicrobials.html
@ -7,7 +7,7 @@
    <a class="navbar-brand me-2" href="../index.html">AMR (for R)</a>
-    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9093</small>
+    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9094</small>
    <button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
--- a/reference/add_custom_microorganisms.html
+++ b/reference/add_custom_microorganisms.html
@ -7,7 +7,7 @@
    <a class="navbar-brand me-2" href="../index.html">AMR (for R)</a>
-    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9093</small>
+    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9094</small>
    <button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
--- a/reference/age.html
+++ b/reference/age.html
@ -7,7 +7,7 @@
    <a class="navbar-brand me-2" href="../index.html">AMR (for R)</a>
-    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9093</small>
+    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9094</small>
    <button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
@ -110,16 +110,16 @@
 <span class="r-in"><span></span></span>
 <span class="r-in"><span><span class="va">df</span></span></span>
 <span class="r-out co"><span class="r-pr">#&gt;</span>    birth_date age age_exact age_at_y2k</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> 1  1965-12-05  58  58.83607         34</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> 1  1965-12-05  58  58.84699         34</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> 2  1980-03-01  44  44.59836         19</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> 2  1980-03-01  44  44.60929         19</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> 3  1949-11-01  74  74.92896         50</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> 3  1949-11-01  74  74.93989         50</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> 4  1947-02-14  77  77.64208         52</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> 4  1947-02-14  77  77.65301         52</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> 5  1940-02-19  84  84.62842         59</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> 5  1940-02-19  84  84.63934         59</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> 6  1988-01-10  36  36.73770         11</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> 6  1988-01-10  36  36.74863         11</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> 7  1997-08-27  27  27.10929          2</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> 7  1997-08-27  27  27.12022          2</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> 8  1978-01-26  46  46.69399         21</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> 8  1978-01-26  46  46.70492         21</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> 9  1972-06-17  52  52.30328         27</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> 9  1972-06-17  52  52.31421         27</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> 10 1986-08-10  38  38.15574         13</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> 10 1986-08-10  38  38.16667         13</span>
 </code></pre></div>
    </div>
  </main><aside class="col-md-3"><nav id="toc" aria-label="Table of contents"><h2>On this page</h2>
--- a/reference/age_groups.html
+++ b/reference/age_groups.html
@ -7,7 +7,7 @@
    <a class="navbar-brand me-2" href="../index.html">AMR (for R)</a>
-    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9093</small>
+    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9094</small>
    <button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
--- a/reference/antibiogram.html
+++ b/reference/antibiogram.html
@ -7,7 +7,7 @@
    <a class="navbar-brand me-2" href="../index.html">AMR (for R)</a>
-    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9093</small>
+    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9094</small>
    <button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
--- a/reference/antibiotic_class_selectors.html
+++ b/reference/antibiotic_class_selectors.html
@ -9,7 +9,7 @@ In short, if you have a column name that resembles an antimicrobial drug, it wil
    <a class="navbar-brand me-2" href="../index.html">AMR (for R)</a>
-    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9093</small>
+    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9094</small>
    <button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
--- a/reference/antibiotics.html
+++ b/reference/antibiotics.html
@ -7,7 +7,7 @@
    <a class="navbar-brand me-2" href="../index.html">AMR (for R)</a>
-    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9093</small>
+    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9094</small>
    <button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
--- a/reference/as.ab.html
+++ b/reference/as.ab.html
@ -7,7 +7,7 @@
    <a class="navbar-brand me-2" href="../index.html">AMR (for R)</a>
-    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9093</small>
+    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9094</small>
    <button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
@ -152,7 +152,7 @@
 <span class="r-out co"><span class="r-pr">#&gt;</span> [1] ERY</span>
 <span class="r-in"><span><span class="fu">as.ab</span><span class="op">(</span><span class="st">"Erythrocin"</span><span class="op">)</span> <span class="co"># trade name</span></span></span>
 <span class="r-out co"><span class="r-pr">#&gt;</span> Class 'ab'</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> [1] CLR</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> [1] ERY</span>
 <span class="r-in"><span><span class="fu">as.ab</span><span class="op">(</span><span class="st">"Romycin"</span><span class="op">)</span> <span class="co"># trade name</span></span></span>
 <span class="r-out co"><span class="r-pr">#&gt;</span> Class 'ab'</span>
 <span class="r-out co"><span class="r-pr">#&gt;</span> [1] ERY</span>
--- a/reference/as.av.html
+++ b/reference/as.av.html
@ -7,7 +7,7 @@
    <a class="navbar-brand me-2" href="../index.html">AMR (for R)</a>
-    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9093</small>
+    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9094</small>
    <button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
--- a/reference/as.disk.html
+++ b/reference/as.disk.html
@ -7,7 +7,7 @@
    <a class="navbar-brand me-2" href="../index.html">AMR (for R)</a>
-    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9093</small>
+    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9094</small>
    <button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
--- a/reference/as.mic.html
+++ b/reference/as.mic.html
@ -7,7 +7,7 @@
    <a class="navbar-brand me-2" href="../index.html">AMR (for R)</a>
-    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9093</small>
+    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9094</small>
    <button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
--- a/reference/as.mo.html
+++ b/reference/as.mo.html
@ -7,7 +7,7 @@
    <a class="navbar-brand me-2" href="../index.html">AMR (for R)</a>
-    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9093</small>
+    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9094</small>
    <button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
--- a/reference/as.sir.html
+++ b/reference/as.sir.html
@ -21,7 +21,7 @@ All breakpoints used for interpretation are available in our clinical_breakpoint
    <a class="navbar-brand me-2" href="../index.html">AMR (for R)</a>
-    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9093</small>
+    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9094</small>
    <button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
@ -785,16 +785,16 @@ A microorganism is categorised as "Resistant" when there is a high likelihood of
 <span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #949494;"># A tibble: 57 × 16</span></span>
 <span class="r-out co"><span class="r-pr">#&gt;</span>    datetime            index ab_given mo_given host_given ab   mo              </span>
 <span class="r-out co"><span class="r-pr">#&gt;</span>  <span style="color: #BCBCBC;">*</span> <span style="color: #949494; font-style: italic;">&lt;dttm&gt;</span>              <span style="color: #949494; font-style: italic;">&lt;int&gt;</span> <span style="color: #949494; font-style: italic;">&lt;chr&gt;</span>    <span style="color: #949494; font-style: italic;">&lt;chr&gt;</span>    <span style="color: #949494; font-style: italic;">&lt;chr&gt;</span>      <span style="color: #949494; font-style: italic;">&lt;ab&gt;</span> <span style="color: #949494; font-style: italic;">&lt;mo&gt;</span>            </span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;"> 1</span> 2024-10-06 <span style="color: #949494;">20:51:09</span>     4 AMX      B_STRPT… human      AMX  B_STRPT_PNMN    </span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;"> 1</span> 2024-10-10 <span style="color: #949494;">14:42:40</span>     4 AMX      B_STRPT… human      AMX  B_STRPT_PNMN    </span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;"> 2</span> 2024-10-06 <span style="color: #949494;">20:51:16</span>     4 genta    Escheri… human      GEN  B_[ORD]_ENTRBCTR</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;"> 2</span> 2024-10-10 <span style="color: #949494;">14:42:47</span>     4 genta    Escheri… human      GEN  B_[ORD]_ENTRBCTR</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;"> 3</span> 2024-10-06 <span style="color: #949494;">20:51:16</span>     4 genta    Escheri… human      GEN  B_[ORD]_ENTRBCTR</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;"> 3</span> 2024-10-10 <span style="color: #949494;">14:42:47</span>     4 genta    Escheri… human      GEN  B_[ORD]_ENTRBCTR</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;"> 4</span> 2024-10-06 <span style="color: #949494;">20:51:17</span>     4 genta    Escheri… cattle     GEN  B_ESCHR_COLI    </span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;"> 4</span> 2024-10-10 <span style="color: #949494;">14:42:48</span>     4 genta    Escheri… cattle     GEN  B_ESCHR_COLI    </span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;"> 5</span> 2024-10-06 <span style="color: #949494;">20:51:17</span>     4 genta    Escheri… cattle     GEN  B_ESCHR_COLI    </span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;"> 5</span> 2024-10-10 <span style="color: #949494;">14:42:48</span>     4 genta    Escheri… cattle     GEN  B_ESCHR_COLI    </span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;"> 6</span> 2024-10-06 <span style="color: #949494;">20:51:09</span>     3 AMX      B_STRPT… human      AMX  B_STRPT_PNMN    </span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;"> 6</span> 2024-10-10 <span style="color: #949494;">14:42:40</span>     3 AMX      B_STRPT… human      AMX  B_STRPT_PNMN    </span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;"> 7</span> 2024-10-06 <span style="color: #949494;">20:51:16</span>     3 tobra    Escheri… human      TOB  B_[ORD]_ENTRBCTR</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;"> 7</span> 2024-10-10 <span style="color: #949494;">14:42:47</span>     3 tobra    Escheri… human      TOB  B_[ORD]_ENTRBCTR</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;"> 8</span> 2024-10-06 <span style="color: #949494;">20:51:16</span>     3 tobra    Escheri… human      TOB  B_[ORD]_ENTRBCTR</span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;"> 8</span> 2024-10-10 <span style="color: #949494;">14:42:47</span>     3 tobra    Escheri… human      TOB  B_[ORD]_ENTRBCTR</span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;"> 9</span> 2024-10-06 <span style="color: #949494;">20:51:17</span>     3 tobra    Escheri… horses     TOB  B_ESCHR_COLI    </span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;"> 9</span> 2024-10-10 <span style="color: #949494;">14:42:48</span>     3 tobra    Escheri… horses     TOB  B_ESCHR_COLI    </span>
-<span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;">10</span> 2024-10-06 <span style="color: #949494;">20:51:17</span>     3 tobra    Escheri… horses     TOB  B_ESCHR_COLI    </span>
+<span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #BCBCBC;">10</span> 2024-10-10 <span style="color: #949494;">14:42:48</span>     3 tobra    Escheri… horses     TOB  B_ESCHR_COLI    </span>
 <span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #949494;"># ℹ 47 more rows</span></span>
 <span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #949494;"># ℹ 9 more variables: host &lt;chr&gt;, method &lt;chr&gt;, input &lt;dbl&gt;, outcome &lt;sir&gt;,</span></span>
 <span class="r-out co"><span class="r-pr">#&gt;</span> <span style="color: #949494;">#   notes &lt;chr&gt;, guideline &lt;chr&gt;, ref_table &lt;chr&gt;, uti &lt;lgl&gt;,</span></span>
--- a/reference/atc_online.html
+++ b/reference/atc_online.html
@ -7,7 +7,7 @@
    <a class="navbar-brand me-2" href="../index.html">AMR (for R)</a>
-    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9093</small>
+    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9094</small>
    <button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
--- a/reference/av_from_text.html
+++ b/reference/av_from_text.html
@ -7,7 +7,7 @@
    <a class="navbar-brand me-2" href="../index.html">AMR (for R)</a>
-    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9093</small>
+    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9094</small>
    <button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
--- a/reference/av_property.html
+++ b/reference/av_property.html
@ -7,7 +7,7 @@
    <a class="navbar-brand me-2" href="../index.html">AMR (for R)</a>
-    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9093</small>
+    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9094</small>
    <button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
--- a/reference/availability.html
+++ b/reference/availability.html
@ -7,7 +7,7 @@
    <a class="navbar-brand me-2" href="../index.html">AMR (for R)</a>
-    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9093</small>
+    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9094</small>
    <button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
--- a/reference/bug_drug_combinations.html
+++ b/reference/bug_drug_combinations.html
@ -7,7 +7,7 @@
    <a class="navbar-brand me-2" href="../index.html">AMR (for R)</a>
-    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9093</small>
+    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9094</small>
    <button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
--- a/reference/clinical_breakpoints.html
+++ b/reference/clinical_breakpoints.html
@ -21,7 +21,7 @@ Use as.sir() to transform MICs or disks measurements to SIR values."><meta prope
    <a class="navbar-brand me-2" href="../index.html">AMR (for R)</a>
-    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9093</small>
+    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9094</small>
    <button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
--- a/reference/count.html
+++ b/reference/count.html
@ -9,7 +9,7 @@ count_resistant() should be used to count resistant isolates, count_susceptible(
    <a class="navbar-brand me-2" href="../index.html">AMR (for R)</a>
-    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9093</small>
+    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9094</small>
    <button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
--- a/reference/custom_eucast_rules.html
+++ b/reference/custom_eucast_rules.html
@ -7,7 +7,7 @@
    <a class="navbar-brand me-2" href="../index.html">AMR (for R)</a>
-    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9093</small>
+    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9094</small>
    <button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
--- a/reference/dosage.html
+++ b/reference/dosage.html
@ -7,7 +7,7 @@
    <a class="navbar-brand me-2" href="../index.html">AMR (for R)</a>
-    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9093</small>
+    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9094</small>
    <button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
--- a/reference/eucast_rules.html
+++ b/reference/eucast_rules.html
@ -9,7 +9,7 @@ To improve the interpretation of the antibiogram before EUCAST rules are applied
    <a class="navbar-brand me-2" href="../index.html">AMR (for R)</a>
-    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9093</small>
+    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9094</small>
    <button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
--- a/reference/example_isolates.html
+++ b/reference/example_isolates.html
@ -7,7 +7,7 @@
    <a class="navbar-brand me-2" href="../index.html">AMR (for R)</a>
-    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9093</small>
+    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9094</small>
    <button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
--- a/reference/example_isolates_unclean.html
+++ b/reference/example_isolates_unclean.html
@ -7,7 +7,7 @@
    <a class="navbar-brand me-2" href="../index.html">AMR (for R)</a>
-    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9093</small>
+    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9094</small>
    <button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
--- a/reference/export_ncbi_biosample.html
+++ b/reference/export_ncbi_biosample.html
@ -7,7 +7,7 @@
    <a class="navbar-brand me-2" href="../index.html">AMR (for R)</a>
-    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9093</small>
+    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9094</small>
    <button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
--- a/reference/first_isolate.html
+++ b/reference/first_isolate.html
@ -9,7 +9,7 @@
    <a class="navbar-brand me-2" href="../index.html">AMR (for R)</a>
-    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9093</small>
+    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9094</small>
    <button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
--- a/reference/g.test.html
+++ b/reference/g.test.html
@ -7,7 +7,7 @@
    <a class="navbar-brand me-2" href="../index.html">AMR (for R)</a>
-    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9093</small>
+    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9094</small>
    <button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
--- a/reference/get_episode.html
+++ b/reference/get_episode.html
@ -7,7 +7,7 @@
    <a class="navbar-brand me-2" href="../index.html">AMR (for R)</a>
-    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9093</small>
+    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9094</small>
    <button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
--- a/reference/ggplot_pca.html
+++ b/reference/ggplot_pca.html
@ -7,7 +7,7 @@
    <a class="navbar-brand me-2" href="../index.html">AMR (for R)</a>
-    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9093</small>
+    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9094</small>
    <button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
--- a/reference/ggplot_sir.html
+++ b/reference/ggplot_sir.html
@ -7,7 +7,7 @@
    <a class="navbar-brand me-2" href="../index.html">AMR (for R)</a>
-    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9093</small>
+    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9094</small>
    <button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
--- a/reference/guess_ab_col.html
+++ b/reference/guess_ab_col.html
@ -7,7 +7,7 @@
    <a class="navbar-brand me-2" href="../index.html">AMR (for R)</a>
-    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9093</small>
+    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9094</small>
    <button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
--- a/reference/index.html
+++ b/reference/index.html
@ -7,7 +7,7 @@
    <a class="navbar-brand me-2" href="../index.html">AMR (for R)</a>
-    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9093</small>
+    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9094</small>
    <button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
--- a/reference/intrinsic_resistant.html
+++ b/reference/intrinsic_resistant.html
@ -7,7 +7,7 @@
    <a class="navbar-brand me-2" href="../index.html">AMR (for R)</a>
-    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9093</small>
+    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9094</small>
    <button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
--- a/reference/italicise_taxonomy.html
+++ b/reference/italicise_taxonomy.html
@ -7,7 +7,7 @@
    <a class="navbar-brand me-2" href="../index.html">AMR (for R)</a>
-    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9093</small>
+    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9094</small>
    <button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
--- a/reference/join.html
+++ b/reference/join.html
@ -7,7 +7,7 @@
    <a class="navbar-brand me-2" href="../index.html">AMR (for R)</a>
-    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9093</small>
+    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9094</small>
    <button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
--- a/reference/key_antimicrobials.html
+++ b/reference/key_antimicrobials.html
@ -7,7 +7,7 @@
    <a class="navbar-brand me-2" href="../index.html">AMR (for R)</a>
-    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9093</small>
+    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9094</small>
    <button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
--- a/reference/kurtosis.html
+++ b/reference/kurtosis.html
@ -7,7 +7,7 @@
    <a class="navbar-brand me-2" href="../index.html">AMR (for R)</a>
-    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9093</small>
+    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9094</small>
    <button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
--- a/reference/like.html
+++ b/reference/like.html
@ -7,7 +7,7 @@
    <a class="navbar-brand me-2" href="../index.html">AMR (for R)</a>
-    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9093</small>
+    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9094</small>
    <button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
--- a/reference/mdro.html
+++ b/reference/mdro.html
@ -7,7 +7,7 @@
    <a class="navbar-brand me-2" href="../index.html">AMR (for R)</a>
-    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9093</small>
+    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9094</small>
    <button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
--- a/reference/mean_amr_distance.html
+++ b/reference/mean_amr_distance.html
@ -7,7 +7,7 @@
    <a class="navbar-brand me-2" href="../index.html">AMR (for R)</a>
-    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9093</small>
+    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9094</small>
    <button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
--- a/reference/microorganisms.codes.html
+++ b/reference/microorganisms.codes.html
@ -7,7 +7,7 @@
    <a class="navbar-brand me-2" href="../index.html">AMR (for R)</a>
-    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9093</small>
+    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9094</small>
    <button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
--- a/reference/microorganisms.groups.html
+++ b/reference/microorganisms.groups.html
@ -7,7 +7,7 @@
    <a class="navbar-brand me-2" href="../index.html">AMR (for R)</a>
-    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9093</small>
+    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9094</small>
    <button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
--- a/reference/microorganisms.html
+++ b/reference/microorganisms.html
@ -9,7 +9,7 @@ This data set is carefully crafted, yet made 100% reproducible from public and a
    <a class="navbar-brand me-2" href="../index.html">AMR (for R)</a>
-    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9093</small>
+    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9094</small>
    <button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
--- a/reference/mo_matching_score.html
+++ b/reference/mo_matching_score.html
@ -7,7 +7,7 @@
    <a class="navbar-brand me-2" href="../index.html">AMR (for R)</a>
-    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9093</small>
+    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9094</small>
    <button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
--- a/reference/mo_property.html
+++ b/reference/mo_property.html
@ -7,7 +7,7 @@
    <a class="navbar-brand me-2" href="../index.html">AMR (for R)</a>
-    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9093</small>
+    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9094</small>
    <button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
--- a/reference/mo_source.html
+++ b/reference/mo_source.html
@ -9,7 +9,7 @@ This is the fastest way to have your organisation (or analysis) specific codes p
    <a class="navbar-brand me-2" href="../index.html">AMR (for R)</a>
-    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9093</small>
+    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9094</small>
    <button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
--- a/reference/pca.html
+++ b/reference/pca.html
@ -7,7 +7,7 @@
    <a class="navbar-brand me-2" href="../index.html">AMR (for R)</a>
-    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9093</small>
+    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9094</small>
    <button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
--- a/reference/plot.html
+++ b/reference/plot.html
@ -9,7 +9,7 @@ Especially the scale_*_mic() functions are relevant wrappers to plot MIC values
    <a class="navbar-brand me-2" href="../index.html">AMR (for R)</a>
-    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9093</small>
+    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9094</small>
    <button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
--- a/reference/proportion.html
+++ b/reference/proportion.html
@ -9,7 +9,7 @@ resistance() should be used to calculate resistance, susceptibility() should be
    <a class="navbar-brand me-2" href="../index.html">AMR (for R)</a>
-    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9093</small>
+    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9094</small>
    <button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
--- a/reference/random.html
+++ b/reference/random.html
@ -7,7 +7,7 @@
    <a class="navbar-brand me-2" href="../index.html">AMR (for R)</a>
-    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9093</small>
+    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9094</small>
    <button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
--- a/reference/resistance_predict.html
+++ b/reference/resistance_predict.html
@ -7,7 +7,7 @@
    <a class="navbar-brand me-2" href="../index.html">AMR (for R)</a>
-    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9093</small>
+    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9094</small>
    <button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
--- a/reference/skewness.html
+++ b/reference/skewness.html
@ -9,7 +9,7 @@ When negative ('left-skewed'): the left tail is longer; the mass of the distribu
    <a class="navbar-brand me-2" href="../index.html">AMR (for R)</a>
-    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9093</small>
+    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9094</small>
    <button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
--- a/reference/translate.html
+++ b/reference/translate.html
@ -7,7 +7,7 @@
    <a class="navbar-brand me-2" href="../index.html">AMR (for R)</a>
-    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9093</small>
+    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">2.1.1.9094</small>
    <button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
--- a/search.json
+++ b/search.json