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(v2.1.1.9155) new mic_p50() and mic_p90() - updated AMR intro

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2025-02-23 11:18:08 +01:00
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# AMR 2.1.1.9154
# AMR 2.1.1.9155
*(this beta version will eventually become v3.0. We're happy to reach a new major milestone soon, which will be all about the new One Health support! Install this beta using [the instructions here](https://msberends.github.io/AMR/#latest-development-version).)*
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* **Other**
* New function `top_n_microorganisms()` to filter a data set to the top *n* of any taxonomic property, e.g., filter to the top 3 species, filter to any species in the top 5 genera, or filter to the top 3 species in each of the top 5 genera
* New function `mo_group_members()` to retrieve the member microorganisms of a microorganism group. For example, `mo_group_members("Strep group C")` returns a vector of all microorganisms that belong to that group.
* New functions `mic_p50()` and `mic_p90()` to retrieve the 50th and 90th percentile of MIC values.
## Changed
* SIR interpretation