mirror of
https://github.com/msberends/AMR.git
synced 2025-07-10 05:41:59 +02:00
Built site for AMR: 1.8.1.9047@a3b97a1
This commit is contained in:
github-actions
@ -10,7 +10,7 @@
|
||||
|
||||
<a class="navbar-brand me-2" href="../index.html">AMR (for R)</a>
|
||||
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">1.8.1.9046</small>
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">1.8.1.9047</small>
|
||||
|
||||
|
||||
<button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
|
||||
@ -178,42 +178,43 @@
|
||||
<h2 id="ref-examples">Examples<a class="anchor" aria-label="anchor" href="#ref-examples"></a></h2>
|
||||
<div class="sourceCode"><pre class="sourceCode r"><code><span class="r-in"><span><span class="fu">random_mic</span><span class="op">(</span><span class="fl">25</span><span class="op">)</span></span></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> Class <mic></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] 2 16 >=256 2 0.5 0.01 0.5 16 1 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [10] <=0.001 1 <=0.001 >=256 2 0.5 >=256 0.002 0.5 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [19] 128 <=0.001 0.01 64 128 16 0.125 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] 256 1 0.001 128 0.001 64 256 0.001 0.002 16 128 256 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [13] 0.001 64 8 0.025 2 0.002 128 64 128 0.001 0.01 0.25 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [25] 0.025</span>
|
||||
<span class="r-in"><span><span class="fu">random_disk</span><span class="op">(</span><span class="fl">25</span><span class="op">)</span></span></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> Class <disk></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] 17 44 7 48 45 20 42 10 37 32 44 27 23 36 11 29 11 21 32 38 19 34 18 10 14</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] 6 22 25 8 47 50 15 46 23 33 41 11 48 17 36 28 15 6 11 44 34 19 9 48 29</span>
|
||||
<span class="r-in"><span><span class="fu">random_rsi</span><span class="op">(</span><span class="fl">25</span><span class="op">)</span></span></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> Class <rsi></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] I S R S R I I S I S I R S R I S I R R I S I S I R</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] I R R R R R I R I R S R S S S I S S S S I R I I S</span>
|
||||
<span class="r-in"><span></span></span>
|
||||
<span class="r-in"><span><span class="co"># \donttest{</span></span></span>
|
||||
<span class="r-in"><span><span class="co"># make the random generation more realistic by setting a bug and/or drug:</span></span></span>
|
||||
<span class="r-in"><span><span class="fu">random_mic</span><span class="op">(</span><span class="fl">25</span>, <span class="st">"Klebsiella pneumoniae"</span><span class="op">)</span> <span class="co"># range 0.0625-64</span></span></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> Class <mic></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] 0.005 0.001 0.002 1 0.5 >=128 0.01 0.002 0.5 0.005 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [11] 64 0.001 0.0625 0.125 1 0.0625 0.001 0.5 0.5 32 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [21] 0.002 8 32 4 8 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] 0.025 32 0.125 32 0.0625 0.25 0.125 0.002 0.125 0.25 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [11] 0.0625 2 2 0.01 0.5 0.001 0.025 0.25 4 0.01 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [21] 0.0625 0.002 32 8 >=64 </span>
|
||||
<span class="r-in"><span><span class="fu">random_mic</span><span class="op">(</span><span class="fl">25</span>, <span class="st">"Klebsiella pneumoniae"</span>, <span class="st">"meropenem"</span><span class="op">)</span> <span class="co"># range 0.0625-16</span></span></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> Class <mic></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] >=16 0.25 4 4 8 8 >=16 0.5 2 0.25 2 1 >=16 2 0.25</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [16] 0.25 0.5 1 0.5 0.25 0.25 2 1 1 1 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] 2 32 8 <=1 16 8 4 32 32 8 <=1 16 8 <=1 4 8 <=1 8 16 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [20] 16 2 4 8 32 16 </span>
|
||||
<span class="r-in"><span><span class="fu">random_mic</span><span class="op">(</span><span class="fl">25</span>, <span class="st">"Streptococcus pneumoniae"</span>, <span class="st">"meropenem"</span><span class="op">)</span> <span class="co"># range 0.0625-4</span></span></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> Class <mic></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] 4 0.0625 4 1 16 8 4 1 1 1 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [11] 0.5 2 1 2 1 4 0.5 1 2 0.0625</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [21] 0.125 1 0.0625 16 0.125 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] <=0.0625 1 0.5 0.125 <=0.0625 0.5 4 0.5 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [9] 4 0.25 2 2 <=0.0625 0.25 0.125 <=0.0625</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [17] 1 1 >=8 2 0.125 4 <=0.0625 2 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [25] 1 </span>
|
||||
<span class="r-in"><span></span></span>
|
||||
<span class="r-in"><span><span class="fu">random_disk</span><span class="op">(</span><span class="fl">25</span>, <span class="st">"Klebsiella pneumoniae"</span><span class="op">)</span> <span class="co"># range 8-50</span></span></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> Class <disk></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] 14 20 12 27 44 48 50 12 30 17 17 41 35 27 46 44 39 9 46 40 14 47 32 23 27</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] 27 46 48 46 45 11 8 45 45 13 31 50 41 43 24 16 32 41 42 42 42 46 41 26 26</span>
|
||||
<span class="r-in"><span><span class="fu">random_disk</span><span class="op">(</span><span class="fl">25</span>, <span class="st">"Klebsiella pneumoniae"</span>, <span class="st">"ampicillin"</span><span class="op">)</span> <span class="co"># range 11-17</span></span></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> Class <disk></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] 15 12 16 16 16 12 12 16 12 14 14 11 17 13 13 17 12 16 15 15 13 11 14 16 17</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] 12 15 14 15 17 12 14 15 11 11 16 15 16 17 13 16 11 17 14 15 16 15 12 16 17</span>
|
||||
<span class="r-in"><span><span class="fu">random_disk</span><span class="op">(</span><span class="fl">25</span>, <span class="st">"Streptococcus pneumoniae"</span>, <span class="st">"ampicillin"</span><span class="op">)</span> <span class="co"># range 12-27</span></span></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> Class <disk></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] 23 15 25 24 25 27 22 23 18 24 17 18 19 25 25 15 23 15 25 19 25 26 23 26 23</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] 27 16 15 19 18 15 24 26 25 18 22 17 20 26 19 18 23 26 16 24 19 22 21 20 20</span>
|
||||
<span class="r-in"><span><span class="co"># }</span></span></span>
|
||||
</code></pre></div>
|
||||
</div>
|
||||
|
||||
Reference in New Issue
Block a user