From ad5f211a8fc7c629be28548c783f15efb5686ae8 Mon Sep 17 00:00:00 2001 From: "Matthijs S. Berends" Date: Mon, 23 Sep 2019 21:24:37 +0200 Subject: [PATCH] (v0.7.1.9085) Salmonella fix --- DESCRIPTION | 2 +- NEWS.md | 2 +- R/mo.R | 2 +- docs/LICENSE-text.html | 2 +- docs/articles/index.html | 2 +- docs/authors.html | 2 +- docs/index.html | 2 +- docs/news/index.html | 8 ++++---- docs/reference/index.html | 2 +- 9 files changed, 12 insertions(+), 12 deletions(-) diff --git a/DESCRIPTION b/DESCRIPTION index 5a9dbb7f..bd42f5b5 100644 --- a/DESCRIPTION +++ b/DESCRIPTION @@ -1,5 +1,5 @@ Package: AMR -Version: 0.7.1.9084 +Version: 0.7.1.9085 Date: 2019-09-23 Title: Antimicrobial Resistance Analysis Authors@R: c( diff --git a/NEWS.md b/NEWS.md index f9656a39..cde0f414 100755 --- a/NEWS.md +++ b/NEWS.md @@ -1,4 +1,4 @@ -# AMR 0.7.1.9084 +# AMR 0.7.1.9085 Last updated: 23-Sep-2019 ### Breaking diff --git a/R/mo.R b/R/mo.R index b074ca28..27974406 100755 --- a/R/mo.R +++ b/R/mo.R @@ -905,7 +905,7 @@ exec_as.mo <- function(x, } uncertainties <- rbind(uncertainties, format_uncertainty_as_df(uncertainty_level = 1, - input = x_backup_without_spp[i], + input = x_backup[i], result_mo = "B_SLMNL_ENTR")) next } diff --git a/docs/LICENSE-text.html b/docs/LICENSE-text.html index 405096e1..bf23abff 100644 --- a/docs/LICENSE-text.html +++ b/docs/LICENSE-text.html @@ -78,7 +78,7 @@ AMR (for R) - 0.7.1.9084 + 0.7.1.9085 diff --git a/docs/articles/index.html b/docs/articles/index.html index a143102a..de0b01f2 100644 --- a/docs/articles/index.html +++ b/docs/articles/index.html @@ -78,7 +78,7 @@ AMR (for R) - 0.7.1.9084 + 0.7.1.9085 diff --git a/docs/authors.html b/docs/authors.html index 7704f960..5f4a4e19 100644 --- a/docs/authors.html +++ b/docs/authors.html @@ -78,7 +78,7 @@ AMR (for R) - 0.7.1.9084 + 0.7.1.9085 diff --git a/docs/index.html b/docs/index.html index 1e7517da..01fbc66d 100644 --- a/docs/index.html +++ b/docs/index.html @@ -42,7 +42,7 @@ AMR (for R) - 0.7.1.9084 + 0.7.1.9085 diff --git a/docs/news/index.html b/docs/news/index.html index 334d9c7c..e0b505e9 100644 --- a/docs/news/index.html +++ b/docs/news/index.html @@ -78,7 +78,7 @@ AMR (for R) - 0.7.1.9084 + 0.7.1.9085 @@ -225,9 +225,9 @@ -
+

-AMR 0.7.1.9084 Unreleased +AMR 0.7.1.9085 Unreleased

Last updated: 23-Sep-2019

@@ -1280,7 +1280,7 @@ Using as.mo(..., allow_uncertain = 3)

Contents

    -
  • 0.7.1.9084
    • +
  • 0.7.1.9085
  • 0.7.1
  • 0.7.0
  • 0.6.1
    • diff --git a/docs/reference/index.html b/docs/reference/index.html index e4f34a9a..0272ac6f 100644 --- a/docs/reference/index.html +++ b/docs/reference/index.html @@ -78,7 +78,7 @@ AMR (for R) - 0.7.1.9084 + 0.7.1.9085