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incorporate Bartlett et al (2022)

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dr. M.S. (Matthijs) Berends
2022-12-19 15:32:41 +01:00
parent 23fe427cbc
commit b1b7534c78
24 changed files with 36375 additions and 36304 deletions
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6
R/mdro.R
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@ -1289,7 +1289,7 @@ mdro <- function(x = NULL,
)
trans_tbl(
3,
which(x$genus == "Clostridium" & x$species == "difficile"),
which(x$genus %in% c("Clostridium", "Clostridioides") & x$species == "difficile"),
c(MTR, VAN),
"any"
)
@ -1390,7 +1390,7 @@ mdro <- function(x = NULL,
)
trans_tbl(
3,
which(x$genus == "Clostridium" & x$species == "difficile"),
which(x$genus %in% c("Clostridium", "Clostridioides") & x$species == "difficile"),
c(MTR, VAN, FDX),
"any"
)
@ -1492,7 +1492,7 @@ mdro <- function(x = NULL,
)
trans_tbl(
3,
which(x$genus == "Clostridium" & x$species == "difficile"),
which(x$genus %in% c("Clostridium", "Clostridioides") & x$species == "difficile"),
c(MTR, VAN, FDX),
"any"
)