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(v1.2.0.9016) fix in rsi_calc()

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dr. M.S. (Matthijs) Berends
2020-06-26 10:21:22 +02:00
parent 033ca49817
commit b31003c0b6
21 changed files with 71 additions and 61 deletions
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NEWS.md
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# AMR 1.2.0.9015
## <small>Last updated: 25-Jun-2020</small>
# AMR 1.2.0.9016
## <small>Last updated: 26-Jun-2020</small>
### New
* Function `ab_from_text()` to retrieve antimicrobial drugs from clinical texts in e.g. health care records, which also corrects for misspelling since it uses `as.ab()` internally:
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* Added antibiotics code "FOX1" for cefoxitin screening (abbreviation "cfsc") to the `antibiotics` data set
### Changed
* Fixed a bug for using `susceptibility` or `resistance()` outside `summarise()`
* Using unexisting columns in all `count_*()`, `proportion_*()`, `susceptibility()` and `resistance()` functions wil now return an error instead of dropping them silently
* Fixed a bug where `eucast_rules()` would not work on a tibble when the `tibble` or `dplyr` package was loaded
* All `*_join_microorganisms()` functions and `bug_drug_combinations()` now return the original data class (e.g. `tibble`s and `data.table`s)
* Fixed a bug where `as.ab()` would return an error on invalid input values