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added prevalence column and alterted as.mo algorith to use it, added ab_name as alias

This commit is contained in:
2018-09-16 16:43:29 +02:00
parent b0ca49d68d
commit b792a2754e
16 changed files with 101 additions and 79 deletions

View File

@ -18,7 +18,7 @@ test_that("mo_property works", {
# test integrity
library(dplyr)
MOs <- AMR::microorganisms %>% filter(!is.na(mo))
MOs <- AMR::microorganisms %>% filter(!is.na(mo), nchar(mo) > 3)
expect_identical(MOs$fullname, mo_fullname(MOs$fullname, language = "en"))
mo_clean <- MOs$mo