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(v2.1.1.9269) Support 7 new languages

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dr. M.S. (Matthijs) Berends
2025-05-02 19:25:19 +02:00
parent 2461631bce
commit b8f0f64287
30 changed files with 577 additions and 382 deletions
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README.Rmd
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@ -11,6 +11,7 @@ knitr::opts_chunk$set(
# fig.path = "man/figures/README-",
out.width = "100%"
)
AMR:::reset_all_thrown_messages()
```
# The `AMR` Package for R
@ -20,7 +21,7 @@ Please visit our comprehensive package website <https://amr-for-r.org> to read m
Overview:
* Provides an **all-in-one solution** for antimicrobial resistance (AMR) data analysis in a One Health approach
* Peer-reviewed, used in over 175 countries, available in 20 languages
* Peer-reviewed, used in over 175 countries, available in `r length(AMR:::LANGUAGES_SUPPORTED)` languages
* Generates **antibiograms** - traditional, combined, syndromic, and even WISCA
* Provides the **full microbiological taxonomy** of `r AMR:::format_included_data_number(AMR::microorganisms)` distinct species and extensive info of `r AMR:::format_included_data_number(NROW(AMR::antimicrobials) + NROW(AMR::antivirals))` antimicrobial drugs
* Applies **CLSI `r min(as.integer(gsub("[^0-9]", "", subset(AMR::clinical_breakpoints, grepl("CLSI", guideline))$guideline)))`-`r max(as.integer(gsub("[^0-9]", "", subset(AMR::clinical_breakpoints, grepl("CLSI", guideline))$guideline)))`** and **EUCAST `r min(as.integer(gsub("[^0-9]", "", subset(AMR::clinical_breakpoints, grepl("EUCAST", guideline))$guideline)))`-`r max(as.integer(gsub("[^0-9]", "", subset(AMR::clinical_breakpoints, grepl("EUCAST", guideline))$guideline)))`** clinical and veterinary breakpoints, and ECOFFs, for MIC and disk zone interpretation