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bring back antibiogram(), without deps

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dr. M.S. (Matthijs) Berends
2023-02-10 16:18:00 +01:00
parent 70a7ba0206
commit bc434db835
42 changed files with 11307 additions and 4734 deletions
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4
man/bug_drug_combinations.Rd
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@ -58,6 +58,10 @@ Determine antimicrobial resistance (AMR) of all bug-drug combinations in your da
The function \code{\link[=format]{format()}} calculates the resistance per bug-drug combination. Use \code{combine_SI = TRUE} (default) to test R vs. S+I and \code{combine_SI = FALSE} to test R+I vs. S.
}
\examples{
# example_isolates is a data set available in the AMR package.
# run ?example_isolates for more info.
example_isolates
\donttest{
x <- bug_drug_combinations(example_isolates)
head(x)