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bring back antibiogram(), without deps

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dr. M.S. (Matthijs) Berends
2023-02-10 16:18:00 +01:00
parent 70a7ba0206
commit bc434db835
42 changed files with 11307 additions and 4734 deletions
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vignettes/benchmarks.Rmd.not
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@ -126,7 +126,7 @@ run_it <- microbenchmark(mo_name(x),
print(run_it, unit = "ms", signif = 3)
```
So getting official taxonomic names of `r format(length(x), big.mark = ",")` (!!) items consisting of `r n_distinct(x)` unique values only takes `r round(median(run_it$time, na.rm = TRUE) / 1e9, 3)` seconds. That is `r round(median(run_it$time, na.rm = TRUE) / length(x), 0)` nanoseconds on average. You only lose time on your unique input values.
So getting official taxonomic names of `r format(length(x), big.mark = " ")` (!!) items consisting of `r n_distinct(x)` unique values only takes `r round(median(run_it$time, na.rm = TRUE) / 1e9, 3)` seconds. That is `r round(median(run_it$time, na.rm = TRUE) / length(x), 0)` nanoseconds on average. You only lose time on your unique input values.
### Precalculated results