P281424/AMR
1
0
Fork 0
mirror of https://github.com/msberends/AMR.git synced 2025-07-11 20:21:55 +02:00
Code Releases Activity

bring back antibiogram(), without deps

Browse Source
This commit is contained in:
dr. M.S. (Matthijs) Berends
2023-02-10 16:18:00 +01:00
parent 70a7ba0206
commit bc434db835
42 changed files with 11307 additions and 4734 deletions
Download Patch File Download Diff File Expand all files Collapse all files

2
vignettes/benchmarks.Rmd.not
View File

@ -126,7 +126,7 @@ run_it <- microbenchmark(mo_name(x),
print(run_it, unit = "ms", signif = 3)
```
So getting official taxonomic names of `r format(length(x), big.mark = ",")` (!!) items consisting of `r n_distinct(x)` unique values only takes `r round(median(run_it$time, na.rm = TRUE) / 1e9, 3)` seconds. That is `r round(median(run_it$time, na.rm = TRUE) / length(x), 0)` nanoseconds on average. You only lose time on your unique input values.
So getting official taxonomic names of `r format(length(x), big.mark = " ")` (!!) items consisting of `r n_distinct(x)` unique values only takes `r round(median(run_it$time, na.rm = TRUE) / 1e9, 3)` seconds. That is `r round(median(run_it$time, na.rm = TRUE) / length(x), 0)` nanoseconds on average. You only lose time on your unique input values.
### Precalculated results