P281424/AMR
1
0
Fork 0
mirror of https://github.com/msberends/AMR.git synced 2025-07-08 20:02:04 +02:00
Code Releases Activity

(v0.7.1.9028) predict update

Browse Source
This commit is contained in:
dr. M.S. (Matthijs) Berends
2019-08-07 15:58:32 +02:00
parent 90c874025a
commit bfa92eb166
11 changed files with 25 additions and 20 deletions
Download Patch File Download Diff File Expand all files Collapse all files

5
R/resistance_predict.R
View File

@ -61,7 +61,7 @@
#' @importFrom dplyr %>% pull mutate mutate_at n group_by_at summarise filter filter_at all_vars n_distinct arrange case_when n_groups transmute ungroup
#' @inheritSection AMR Read more on our website!
#' @examples
#' x <- resistance_predict(septic_patients, col_ab = "AMX", year_min = 2010)
#' x <- resistance_predict(septic_patients, col_ab = "AMX", year_min = 2010, model = "binomial")
#' plot(x)
#' ggplot_rsi_predict(x)
#'
@ -70,7 +70,7 @@
#' x <- septic_patients %>%
#' filter_first_isolate() %>%
#' filter(mo_genus(mo) == "Staphylococcus") %>%
#' resistance_predict("PEN")
#' resistance_predict("PEN", model = "binomial")
#' plot(x)
#'
#'
@ -86,6 +86,7 @@
#' filter(mo == as.mo("E. coli")) %>%
#' resistance_predict(col_ab = "AMX",
#' col_date = "date",
#' model = "binomial",
#' info = FALSE,
#' minimum = 15)
#'