diff --git a/DESCRIPTION b/DESCRIPTION index f32292ca..368e022a 100644 --- a/DESCRIPTION +++ b/DESCRIPTION @@ -1,6 +1,6 @@ Package: AMR -Version: 2.1.1.9090 -Date: 2024-10-04 +Version: 2.1.1.9092 +Date: 2024-10-06 Title: Antimicrobial Resistance Data Analysis Description: Functions to simplify and standardise antimicrobial resistance (AMR) data analysis and to work with microbial and antimicrobial properties by diff --git a/NEWS.md b/NEWS.md index a0c9916e..da408f98 100644 --- a/NEWS.md +++ b/NEWS.md @@ -1,4 +1,4 @@ -# AMR 2.1.1.9090 +# AMR 2.1.1.9092 *(this beta version will eventually become v3.0. We're happy to reach a new major milestone soon, which will be all about the new One Health support! Install this beta using [the instructions here](https://msberends.github.io/AMR/#latest-development-version).)* diff --git a/_pkgdown.yml b/_pkgdown.yml index ef56c538..47ef7619 100644 --- a/_pkgdown.yml +++ b/_pkgdown.yml @@ -57,10 +57,7 @@ footer: home: sidebar: - structure: [gpthelp, toc, links, authors] - components: - gpthelp: - text: '' + structure: [toc, links, authors] navbar: title: "AMR (for R)" diff --git a/pkgdown/extra.css b/pkgdown/extra.css index 957e9ce1..2ea66684 100644 --- a/pkgdown/extra.css +++ b/pkgdown/extra.css @@ -119,6 +119,10 @@ body.amr-for-python * { width: 150px; } +.amr-gpt-assistant * { + width: 90%; +} + .template-reference-index .section-desc { font-style: italic; text-align: justify; diff --git a/pkgdown/extra.js b/pkgdown/extra.js index 752c9a38..c102ef83 100644 --- a/pkgdown/extra.js +++ b/pkgdown/extra.js @@ -30,8 +30,10 @@ */ $(document).ready(function() { + // add GPT assistant info + $('aside').prepend('
'); - // Replace 'Developers' with 'Maintainers' on the main page, and "Contributors" on the Authors page + // replace 'Developers' with 'Maintainers' on the main page, and "Contributors" on the Authors page $(".developers h2").text("Maintainers"); $(".citation h2:nth(0)").text("All contributors"); $(".citation h2:nth(1)").text("How to Cite"); @@ -42,6 +44,9 @@ $(document).ready(function() { $("#ref-examples ~ div pre").html($("#ref-examples ~ div pre").html().replaceAll("# \\dontrun{", "")); $("#ref-examples ~ div pre").html($("#ref-examples ~ div pre").html().replaceAll("# }", "")); } + + // rename 'Package index' to 'Manual' (weird design choice to pick 'Package index') + // remove leading newline in code examples on changelog if ($("body .template-news").length > 0) {