mo_source improvement

man/mo_source.Rd

@@ -45,15 +45,19 @@ set_mo_source("home/me/ourcodes.xlsx")
 # Created mo_source file '~/.mo_source.rds' from 'home/me/ourcodes.xlsx'.
 }
 
-It has now created a file "~/.mo_source.rds" with the contents of our Excel file. It it an R specific format with great compression.
+It has now created a file "~/.mo_source.rds" with the contents of our Excel file, but only the first column with foreign values and the 'mo' column will be kept.
 
 And now we can use it in our functions:
 \preformatted{
 as.mo("lab_mo_ecoli")
-# B_ESCHR_COL
+[1] B_ESCHR_COL
 
 mo_genus("lab_mo_kpneumoniae")
-# "Klebsiella"
+[1] "Klebsiella"
+
+# other input values still work too
+as.mo(c("Escherichia coli", "E. coli", "lab_mo_ecoli"))
+[1] B_ESCHR_COL  B_ESCHR_COL  B_ESCHR_COL
 }
 
 If we edit the Excel file to, let's say, this:
@@ -71,10 +75,10 @@ If we edit the Excel file to, let's say, this:
 \preformatted{
 as.mo("lab_mo_ecoli")
 # Updated mo_source file '~/.mo_source.rds' from 'home/me/ourcodes.xlsx'.
-# B_ESCHR_COL
+[1] B_ESCHR_COL
 
 mo_genus("lab_Staph_aureus")
-# "Staphylococcus"
+[1] "Staphylococcus"
 }
 
 To remove the reference completely, just use any of these: