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(v0.8.0.9036) complete documentation rewrite

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dr. M.S. (Matthijs) Berends
2019-11-28 22:32:17 +01:00
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man/example_isolates.Rd
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@ -5,17 +5,17 @@
\alias{example_isolates}
\title{Data set with 2,000 example isolates}
\format{A \code{\link{data.frame}} with 2,000 observations and 49 variables:
\describe{
\item{\code{date}}{date of receipt at the laboratory}
\item{\code{hospital_id}}{ID of the hospital, from A to D}
\item{\code{ward_icu}}{logical to determine if ward is an intensive care unit}
\item{\code{ward_clinical}}{logical to determine if ward is a regular clinical ward}
\item{\code{ward_outpatient}}{logical to determine if ward is an outpatient clinic}
\item{\code{age}}{age of the patient}
\item{\code{gender}}{gender of the patient}
\item{\code{patient_id}}{ID of the patient}
\item{\code{mo}}{ID of microorganism created with \code{\link{as.mo}}, see also \code{\link{microorganisms}}}
\item{\code{PEN:RIF}}{40 different antibiotics with class \code{rsi} (see \code{\link{as.rsi}}); these column names occur in \code{\link{antibiotics}} data set and can be translated with \code{\link{ab_name}}}
\itemize{
\item \code{date}\cr date of receipt at the laboratory
\item \code{hospital_id}\cr ID of the hospital, from A to D
\item \code{ward_icu}\cr logical to determine if ward is an intensive care unit
\item \code{ward_clinical}\cr logical to determine if ward is a regular clinical ward
\item \code{ward_outpatient}\cr logical to determine if ward is an outpatient clinic
\item \code{age}\cr age of the patient
\item \code{gender}\cr gender of the patient
\item \code{patient_id}\cr ID of the patient
\item \code{mo}\cr ID of microorganism created with \code{\link[=as.mo]{as.mo()}}, see also \link{microorganisms}
\item \code{PEN:RIF}\cr 40 different antibiotics with class \code{\link{rsi}} (see \code{\link[=as.rsi]{as.rsi()}}); these column names occur in \link{antibiotics} data set and can be translated with \code{\link[=ab_name]{ab_name()}}
}}
\usage{
example_isolates