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unit tests

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dr. M.S. (Matthijs) Berends 2023-01-06 13:45:20 +01:00
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DESCRIPTION
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Package: AMR Package: AMR
Version: 1.8.2.9084 Version: 1.8.2.9085
Date: 2023-01-06 Date: 2023-01-06
Title: Antimicrobial Resistance Data Analysis Title: Antimicrobial Resistance Data Analysis
Description: Functions to simplify and standardise antimicrobial resistance (AMR) Description: Functions to simplify and standardise antimicrobial resistance (AMR)

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NEWS.md
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# AMR 1.8.2.9084 # AMR 1.8.2.9085
*(this beta version will eventually become v2.0! We're happy to reach a new major milestone soon!)* *(this beta version will eventually become v2.0! We're happy to reach a new major milestone soon!)*

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inst/tinytest/test-mo_property.R
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@ -102,7 +102,7 @@ expect_equal(names(mo_info("Escherichia coli")), c(
)) ))
expect_inherits(mo_info(c("Escherichia coli", "Staphylococcus aureus")), "list") expect_inherits(mo_info(c("Escherichia coli", "Staphylococcus aureus")), "list")
expect_equal(as.character(table(mo_pathogenicity(example_isolates$mo))) expect_equal(as.character(table(mo_pathogenicity(example_isolates$mo))),
c("1561", "422", "1", "16")) c("1561", "422", "1", "16"))
expect_equal(mo_ref("Escherichia coli"), "Castellani et al., 1919") expect_equal(mo_ref("Escherichia coli"), "Castellani et al., 1919")