From cf182a28f1c7fb1fee08147c8c82996f1661ff98 Mon Sep 17 00:00:00 2001 From: github-actions <41898282+github-actions[bot]@users.noreply.github.com> Date: Fri, 12 Sep 2025 15:01:39 +0000 Subject: [PATCH] Built site for AMR@3.0.0.9031: e8c99f2 --- 404.html | 2 +- LICENSE-text.html | 2 +- articles/AMR.html | 10 ++++---- articles/AMR_for_Python.html | 2 +- articles/AMR_with_tidymodels.html | 2 +- .../figure-html/unnamed-chunk-14-1.png | Bin 54352 -> 65285 bytes .../figure-html/unnamed-chunk-15-1.png | Bin 160405 -> 140523 bytes articles/EUCAST.html | 2 +- articles/PCA.html | 2 +- .../figure-html/unnamed-chunk-6-1.png | Bin 94627 -> 114679 bytes .../figure-html/unnamed-chunk-7-1.png | Bin 94774 -> 117994 bytes articles/WHONET.html | 2 +- .../figure-html/unnamed-chunk-7-1.png | Bin 62423 -> 66419 bytes articles/WISCA.html | 2 +- articles/datasets.html | 4 ++-- articles/index.html | 2 +- authors.html | 2 +- index.html | 2 +- news/index.html | 9 +++---- pkgdown.yml | 2 +- reference/AMR-deprecated.html | 2 +- reference/AMR-options.html | 2 +- reference/AMR.html | 2 +- reference/WHOCC.html | 2 +- reference/WHONET.html | 2 +- reference/ab_from_text.html | 2 +- reference/ab_property.html | 2 +- reference/add_custom_antimicrobials.html | 2 +- reference/add_custom_microorganisms.html | 2 +- reference/age.html | 22 +++++++++--------- reference/age_groups-1.png | Bin 43679 -> 49813 bytes reference/age_groups.html | 2 +- reference/antibiogram.html | 2 +- reference/antimicrobial_selectors.html | 2 +- reference/antimicrobials.html | 2 +- reference/as.ab.html | 2 +- reference/as.av.html | 2 +- reference/as.disk.html | 2 +- reference/as.mic.html | 2 +- reference/as.mo.html | 2 +- reference/as.sir.html | 10 ++++---- reference/atc_online.html | 2 +- reference/av_from_text.html | 2 +- reference/av_property.html | 2 +- reference/availability.html | 2 +- reference/bug_drug_combinations.html | 2 +- reference/clinical_breakpoints.html | 2 +- reference/count.html | 2 +- reference/custom_eucast_rules.html | 2 +- reference/custom_mdro_guideline.html | 2 +- reference/dosage.html | 2 +- reference/eucast_rules.html | 2 +- reference/example_isolates.html | 2 +- reference/example_isolates_unclean.html | 2 +- reference/export_ncbi_biosample.html | 2 +- reference/first_isolate.html | 2 +- reference/g.test.html | 2 +- reference/get_episode.html | 2 +- reference/ggplot_pca-2.png | Bin 89435 -> 109608 bytes reference/ggplot_pca.html | 2 +- reference/ggplot_sir-10.png | Bin 46478 -> 53003 bytes reference/ggplot_sir-2.png | Bin 47090 -> 50275 bytes reference/ggplot_sir-3.png | Bin 46245 -> 50216 bytes reference/ggplot_sir-4.png | Bin 36819 -> 41057 bytes reference/ggplot_sir-5.png | Bin 48805 -> 50964 bytes reference/ggplot_sir-6.png | Bin 34360 -> 38421 bytes reference/ggplot_sir-8.png | Bin 36287 -> 40205 bytes reference/ggplot_sir-9.png | Bin 45626 -> 49739 bytes reference/ggplot_sir.html | 3 ++- reference/guess_ab_col.html | 2 +- reference/index.html | 2 +- reference/intrinsic_resistant.html | 2 +- reference/italicise_taxonomy.html | 2 +- reference/join.html | 2 +- reference/key_antimicrobials.html | 2 +- reference/kurtosis.html | 2 +- reference/like.html | 2 +- reference/mdro.html | 2 +- reference/mean_amr_distance.html | 2 +- reference/microorganisms.codes.html | 2 +- reference/microorganisms.groups.html | 2 +- reference/microorganisms.html | 2 +- reference/mo_matching_score.html | 2 +- reference/mo_property.html | 2 +- reference/mo_source.html | 2 +- reference/pca-2.png | Bin 87460 -> 108027 bytes reference/pca-3.png | Bin 88574 -> 108371 bytes reference/pca.html | 2 +- reference/plot-10.png | Bin 87338 -> 87342 bytes reference/plot-11.png | Bin 70716 -> 70715 bytes reference/plot-13.png | Bin 72842 -> 73842 bytes reference/plot-14.png | Bin 90564 -> 86113 bytes reference/plot-15.png | Bin 85075 -> 83999 bytes reference/plot.html | 2 +- reference/proportion.html | 2 +- reference/random.html | 2 +- reference/resistance_predict.html | 6 ++++- reference/skewness.html | 2 +- reference/top_n_microorganisms.html | 2 +- reference/translate.html | 2 +- search.json | 2 +- 101 files changed, 107 insertions(+), 101 deletions(-) diff --git a/404.html b/404.html index b511344cc..332a539ae 100644 --- a/404.html +++ b/404.html @@ -31,7 +31,7 @@ AMR (for R) - 3.0.0.9030 + 3.0.0.9031