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try rocker docker

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This commit is contained in:
dr. M.S. (Matthijs) Berends 2019-04-06 16:13:09 +02:00
parent 501f5db020
commit cf54201088
1 changed files with 2 additions and 8 deletions
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10
.gitlab-ci.yml
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@ -24,8 +24,7 @@ stages:
- test - test
- deploy - deploy
# debian stretch only contains R 3.3... image: rocker/r-base
image: debian:buster-slim
before_script: before_script:
- apt-get update -qq - apt-get update -qq
@ -57,10 +56,8 @@ cache:
R-release: R-release:
stage: build stage: build
image: debian:buster-slim
allow_failure: false allow_failure: false
script: script:
- apt-get install -y r-base
- Rscript -e 'sessionInfo()' - Rscript -e 'sessionInfo()'
# install missing and outdated packages # install missing and outdated packages
- Rscript -e 'source(".gitlab-ci.R"); gl_update_pkg_all(repos = "https://cran.rstudio.com", quiet = TRUE, install_pkgdown = TRUE)' - Rscript -e 'source(".gitlab-ci.R"); gl_update_pkg_all(repos = "https://cran.rstudio.com", quiet = TRUE, install_pkgdown = TRUE)'
@ -98,14 +95,13 @@ R-devel:
coverage: coverage:
stage: test stage: test
image: debian:buster-slim
allow_failure: true allow_failure: true
when: on_success when: on_success
only: only:
- premaster - premaster
- master - master
script: script:
- apt-get install --yes git r-base - apt-get install --yes git
# install missing and outdated packages # install missing and outdated packages
- Rscript -e 'source(".gitlab-ci.R"); gl_update_pkg_all(repos = "https://cran.rstudio.com", quiet = TRUE, install_pkgdown = TRUE)' - Rscript -e 'source(".gitlab-ci.R"); gl_update_pkg_all(repos = "https://cran.rstudio.com", quiet = TRUE, install_pkgdown = TRUE)'
# codecov token is set in https://gitlab.com/msberends/AMR/settings/ci_cd # codecov token is set in https://gitlab.com/msberends/AMR/settings/ci_cd
@ -114,12 +110,10 @@ coverage:
pages: pages:
stage: deploy stage: deploy
image: debian:buster-slim
when: always when: always
only: only:
- master - master
script: script:
- apt-get install --yes r-base
# install missing and outdated packages # install missing and outdated packages
- Rscript -e 'source(".gitlab-ci.R"); gl_update_pkg_all(repos = "https://cran.rstudio.com", quiet = TRUE, install_pkgdown = TRUE)' - Rscript -e 'source(".gitlab-ci.R"); gl_update_pkg_all(repos = "https://cran.rstudio.com", quiet = TRUE, install_pkgdown = TRUE)'
- Rscript -e "devtools::install(build = TRUE, upgrade = FALSE)" - Rscript -e "devtools::install(build = TRUE, upgrade = FALSE)"